Haloprofundus sp. MHR1: FCF25_06095
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Entry
FCF25_06095 CDS
T05952
Name
(GenBank) PAS domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halm03000
]
FCF25_06095
Transcription factors [BR:
halm03000
]
Prokaryotic type
Helix-turn-helix
Other families
FCF25_06095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAT
PAS_9
HTH_10
PAS
PAS_4
PAS_3
GAF_2
PAS_8
GAF
SlpA_D2
Motif
Other DBs
NCBI-ProteinID:
QCJ46714
LinkDB
All DBs
Position
complement(1214455..1216485)
Genome browser
AA seq
676 aa
AA seq
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MSHQNTPEDTRRIASESPDTTYRCTIWLKTDGTIAAVTDLFLETTGYTREELVGHDALEL
LSQSTGEDGSVDDERNDALAEAIQRLLDADTIAVETVETEISTADGDTASFALDLISRPP
DEEFRGSVGVQPSESEQDIRDRELWVKTRAMDDAGIALCLSDPNRPDNPLIYVNKGFEEV
TGYTASEAIGQNCRFLQGAETDPETVDQLREAVDEGESASVELKNYRKDGTPFWNQVEIV
PIRDEQGDIVHYLGSQRDITERKRREKQLREQREQLLALDQINRVIRGINSALVSMSTRE
EVEEIVCERLVDSPSYDAAWIGEVNSARGTISPRASAGIDAASLSSETESFDATDVEHGT
PAMRATRSQEVEVVTDVEDEPDSEWRSWALENGYHSVAAVPIGFQEFQYDVLTIYSSREH
GFTGQERDAVAQLREIVGHAINAIERKEALLDNIVVELEFVMRDPDSPLFAATDDSDCTV
TYERTIPLADDKAIQFIRVHGMGWEEVQAALTDDPSVDHARVVSEQEDGCLVEIRSPETP
ITSKLATYGGQVVEAVVEDGEFRVVAEVPHEIDIREIATAVQRAYPDAELVAQRSTTRSV
QTLKQFQSALASRLTDKQQAALEAAFAAGYFTWPRESTGEEIAEGLGIAPATFHEHLRNG
LSQLLGASLEGADRSD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccagaacacgccggaagatacacgtcgaatcgcttcggaatcccccgacacg
acgtaccgttgcactatctggctcaagacggacggaaccatcgccgcggtgaccgacctg
ttcctggagacgaccggctacacccgcgaggagctcgtcggccacgacgcgctcgaactg
ttgagccagtctaccggagaggacggctcggtcgacgacgagcgtaacgacgcgctcgcc
gaggcgattcagcgcctactcgacgccgacaccatcgcggtcgagaccgtcgagacggag
atatcgaccgccgacggcgacaccgcctcgttcgcgctggacctcatctcgcggccgccg
gacgaggagttccgcggctccgtcggtgtccaaccgagcgagagcgaacaggacatccgg
gaccgcgagctgtgggtgaaaacgcgtgcgatggacgacgccggcatcgcgctctgtctc
tcggaccccaaccgtcccgacaacccgctcatctacgtcaacaaggggttcgaggaggtc
accggctacacggccagcgaggcgatcgggcagaactgtcgctttctccagggcgcagag
accgaccccgagacggtcgaccaactgcgcgaagccgtcgacgagggcgagtccgcctcc
gtcgaactgaagaactaccgcaaagacggcacgccgttttggaaccaggtcgagatcgtg
cccatccgtgacgaacagggcgatatcgtccactacctcggctcacagcgagacatcacc
gagcggaaacggcgggagaagcagctccgcgagcagcgcgaacagctgttggcgctcgac
cagatcaaccgcgtcatcaggggaatcaacagcgcgctcgtctcgatgtcgacccgcgaa
gaggtcgaggagatcgtctgcgagcgtctcgtcgactccccgtcgtacgacgcggcgtgg
atcggcgaggtgaacagcgcccgcggaacgatttcgccgcgcgccagcgccggcatcgac
gccgcctcgctgagttcggagaccgagtcgttcgacgccaccgacgtcgagcacggtacc
ccggcgatgcgagcgacgcgaagccaggaggtcgaagtcgtcaccgacgtcgaagacgaa
ccggacagcgagtggcgctcgtgggccctggagaacggctaccactcggtcgccgccgtc
cccatcgggttccaggagttccagtacgacgtgctcactatctactcgtcgcgcgaacac
gggtttaccggtcaggaacgcgacgcagtcgcccaactccgcgagatcgtcggccacgcc
atcaacgccatcgagcgcaaggaagcgctgttagacaacatcgtcgtcgaactggagttc
gtcatgcgcgaccccgacagcccgctgttcgcggcgaccgacgacagcgactgcacggtg
acgtacgagcggacgattccgctcgccgacgacaaagccatccagttcatccgcgtccac
ggcatgggctgggaggaggtccaggccgcgctcaccgacgacccttccgtcgaccacgcc
cgcgtcgtctccgaacaggaagacggctgtctggtcgagattcgttcgccggagacgcct
atcacctcgaaactggcgacgtacggcggccaggtggtagaggccgtcgtcgaggacggc
gagttccgcgtcgtcgccgaagtgccccacgagatagacatccgcgaaatcgccaccgcg
gtccaacgagcgtaccccgacgccgagctcgtcgcccagcgctcgacgacgcgcagcgtc
cagacgctcaagcagttccagtcggcgctggcctcgcgactcacggacaaacagcaggcc
gctctcgaagcggcgttcgccgccggctacttcacctggccgcgcgagagcaccggcgag
gagatcgccgaggggctcggcatcgctcccgcgacgttccacgaacacctccgaaacgga
ctctcgcagctgctcggggcgtctctggaaggcgccgaccgctcggactga
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