KEGG   Haloprofundus sp. MHR1: FCF25_07520
Entry
FCF25_07520       CDS       T05952                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
halm  Haloprofundus sp. MHR1
Pathway
halm03030  DNA replication
halm03410  Base excision repair
halm03420  Nucleotide excision repair
halm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:halm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FCF25_07520
   03410 Base excision repair
    FCF25_07520
   03420 Nucleotide excision repair
    FCF25_07520
   03430 Mismatch repair
    FCF25_07520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halm03032]
    FCF25_07520
   03400 DNA repair and recombination proteins [BR:halm03400]
    FCF25_07520
DNA replication proteins [BR:halm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    FCF25_07520
DNA repair and recombination proteins [BR:halm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FCF25_07520
   MMR (mismatch excision repair)
    Other MMR factors
     FCF25_07520
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    FCF25_07520
SSDB
Motif
Pfam: PCNA_N PCNA_C GBD_Hemicentin
Other DBs
NCBI-ProteinID: QCJ46966
LinkDB
Position
complement(1502127..1502870)
AA seq 247 aa
MFQAIVSASTLRDALDSVSVLVDECKIRLNEDELAIRAVDPANVGMVDLSLDAAAFESYE
ADGGVIGVNLSRLEDIAGMANTGDLVHLELDEETRKLHIQIEGLSYTLALIDPDSIRQEP
DIPDLDLPATIVVEGTHLDRGIKAADMVSDHIGLRVDEDAETFHIEAEGDTDDVDLELGR
DDLIDLVAGPADSLFSLDYLKDMNKAIPSDAEVTVELGEEFPVKLHYEFGEGMGHVTYML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttccaggccatcgtgagcgcgtcgacgctccgggacgcgctcgattcggtgagcgtg
ttggtcgacgagtgtaagattcgactcaacgaggacgaactcgcaattcgagccgtcgac
cccgcgaacgtggggatggtcgacctctcgctcgacgccgcggcgttcgagtcctacgaa
gcagacggcggcgtcatcggcgtcaacctctcgcgactggaggatatcgcggggatggcg
aacaccggcgacctcgtccacctcgaactcgacgaggagacgcgaaagcttcacatccag
atagagggcctctcctacacgctcgcgctcatcgaccccgactccatccggcaggagccg
gacatcccggacctcgacctcccggcgaccatcgtcgtcgaaggcacccacctcgaccgc
ggtatcaaagccgccgacatggtgtcagaccacatcggtctccgcgtcgacgaggacgcc
gagacgttccacatcgaagccgagggcgacaccgacgacgtcgacctcgaactcggccgc
gacgacctcatcgacctcgtcgccggtcccgccgactcgctgttcagcctcgactacctc
aaggacatgaacaaggcgattccctccgacgccgaggtcaccgtcgaactcggcgaggag
ttccccgtcaaacttcactacgagttcggcgagggcatgggccacgtgacgtacatgctg
gccccgcgcatccagagcgactga

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