Haloprofundus sp. MHR1: FCF25_08560
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Entry
FCF25_08560 CDS
T05952
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
halm03009
]
FCF25_08560
Ribosome biogenesis [BR:
halm03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
FCF25_08560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
AAA_16
AAA_22
AAA_14
AAA
RNA_helicase
Fer4_6
nSTAND3
Rad17
Fer4
NACHT
NB-ARC
AAA_23
AAA_24
Fer4_7
Fer4_10
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
QCJ47162
LinkDB
All DBs
Position
complement(1694444..1696261)
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AA seq
605 aa
AA seq
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MADDSIAVVDLDRCQPDRCNYECANYCPPNRTGKECITTRGEDTEEGDPDQIRISEEICL
GETCGICVEKCPFDAIEIINLPQELTEDPTHRYGENAFALYGLPVPEPGKVTGILGPNGI
GKSTAVRILAEEITPNLGDYGAEPDWETVLDRYRGTELQNYIERLMDGDITVARKPQYVD
QIPKQFDGKTRELLEHTDERGQLDYLVDELSIAPVMDQSIDSISGGELQRVALAATLARD
ADFYFLDEITPYLDIGQRVKAARLIQELAEDDADRSMLVVEHDLAILDLLTDTLHIAYGE
PSAFGVVTPPKSVRNGINEYLKGYLSNENMRIRPNAITFEQHAPRETAKSAPLVEYPDLT
KSYGEGEFSLDVEGGTIHHGEVLGVVGPNGIGKSTLAKMFAGQLEPDEGELDFLLDIAYK
PQYIEIDQPMRVDVFLSSITDDFGSSYWNTEVAQPLQLERIMEQNLTDLSGGERQRVAIA
ACLSKDADLYVLDEPSAHLDVEQRVQATTAIRRYAENHDATVLVIDHDIYMMDLLADRLM
VFDGEPAQHGHASTPQEMRAGMNDFLSDLEITFRRDERTGRPRINKPGSQLDREQKKQGE
YYYAP
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagcatcgccgtggtcgacctcgaccggtgtcaacccgaccgctgcaac
tacgagtgcgcgaactactgcccgccgaaccgcacgggcaaggagtgtatcaccactcgc
ggcgaggacaccgaagagggcgaccccgaccagattcgcatctccgaggagatctgcctc
ggcgaaacctgcggcatctgcgtcgagaagtgtccgttcgacgctatcgagatcatcaac
ctgccgcaggaactcaccgaggaccccactcaccgctacggcgagaacgcgttcgcgctg
tacggcctcccggtgccggagccggggaaggtgacgggtatcctcgggccgaacggtatc
ggtaagtccaccgccgttcgcatcctcgccgaggagataacgccgaacctcggcgactac
ggcgcggagcccgactgggagacggtgctcgaccgctaccgcggcacggagctccagaac
tacatcgagcgcctgatggacggcgacatcaccgtcgcccgcaagccgcagtacgtcgac
cagattccgaagcagttcgacgggaagacccgcgaactgctcgaacacaccgacgagcgc
ggccaactcgactacctcgtcgacgaactctccatcgccccggtgatggaccagtccatc
gactccatctccggcggcgaactccagcgcgtcgcgctggcggcgacgctcgcgcgcgac
gccgacttctacttcctcgacgagattacgccgtacctcgacatcggccagcgcgtcaag
gccgcgcgcctgattcaggaactcgccgaggacgacgccgaccgttcgatgctcgtcgtc
gaacacgacctggcgattctcgacctcctgaccgatacgctccacatcgcctacggcgag
ccgagcgcgttcggtgtcgtcaccccgccgaaatcggttcgcaacggcatcaacgagtac
ttgaagggctacctctcgaacgagaacatgcgcatccggccgaacgccatcacgttcgag
caacacgcgccccgagagacggccaagagcgcgccgctggtcgagtaccccgacctgacc
aagtcgtacggcgagggcgagttctcgctcgacgtcgagggcggaaccatccaccacggc
gaggtgctcggcgtcgtcggtcccaacggtatcgggaagtcgacgctggcgaagatgttc
gccggacagctcgagcccgacgagggcgaactcgacttcctgctcgacatcgcctacaag
ccgcagtacatcgagatcgaccagccgatgcgcgtcgacgtcttcctctcctctatcacc
gacgacttcggctcgtcgtactggaacaccgaggtcgcccaaccgctccaactcgaacgc
atcatggagcagaacctcaccgacctctccggcggcgagcgccagcgcgtcgccatcgcg
gcctgtctgtcgaaagacgccgacctctacgtgctcgacgagccgtcggcgcacctcgac
gtcgaacagcgcgtgcaggcgacgacggccatccgccgctacgccgagaaccacgacgcg
acggtgctcgtcatcgaccacgacatctacatgatggacctcttggccgaccgcctgatg
gtgttcgacggcgaacccgcccagcacggtcacgcctcgacgccccaggagatgcgcgcg
gggatgaacgacttcctctcggacctcgaaatcacgttccgccgcgacgagcggacggga
cgcccgcgcatcaacaagcccggcagccagttggaccgcgagcagaagaagcagggcgag
tactactacgcgccgtaa
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