Haloprofundus sp. MHR1: FCF25_09155
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Entry
FCF25_09155 CDS
T05952
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FCF25_09155 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halm03021
]
FCF25_09155 (rpoA2)
Enzymes [BR:
halm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FCF25_09155 (rpoA2)
Transcription machinery [BR:
halm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FCF25_09155 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
HHH_RecD2
Motif
Other DBs
NCBI-ProteinID:
QCJ47273
LinkDB
All DBs
Position
complement(1813760..1814968)
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AA seq
402 aa
AA seq
DB search
MTEITDDIEAVVEDTELPRRLKDRVYRTIEERDDVSVEKADDIARAVEVRYLDTRVDPLD
PVGTVSAQSIGEPGTQMTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDTPMMTVHLED
EYAEDREKAHEVVWSIEASKILALGDVSTNVADMLVQVDLNDETLMERWPRASNVDEVAD
EIADTIEDALGVTTRLSGTVIEFGPDQPSYRKLLQLVEELRDVVFKGIEEVTRVVIRKEK
TDDGEEFVLYTEGSAFGDVLAIEGVDASRTTCNNIHEIHRNLGVEAAREAIINETMETLE
EQGLDDVNVRHLMLVADIMTNRGTIESIGRHGISGSKESVLARAAFEVTVNHLLDAAIHG
EEDDLNGVIENVIVGKPVAIGTGDVDLRMGSFSANTEQPSDD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgactgagatcacagacgacatcgaggccgtcgtcgaggacaccgagctcccgcgacga
ctcaaagaccgcgtgtaccgcaccatcgaggaacgagacgacgtgagcgtcgagaaagcc
gacgatatcgcccgcgccgtcgaggtccggtatctcgacacccgcgtcgacccgctcgac
cccgtcggcaccgtctccgcgcagtccatcggggagccggggacgcagatgacgatgaac
acgttccactacgcgggcgtcgccgagatcgacgtgacgcaggggctgccgcggctcatc
gagctcgtggacgcgcggaagacgccggacacgccgatgatgacggtccacctcgaagac
gagtacgccgaggaccgcgagaaggcccacgaggtcgtctggagcatcgaggcgtcgaag
atcttggcgctcggcgacgtgtcgacgaacgtcgccgacatgctcgtgcaggtcgacctc
aacgacgagacgctgatggagcggtggccccgcgcctcgaacgtcgacgaggtcgccgac
gagatcgccgacaccatcgaggacgccctcggcgtgacgactcgactgtcggggacggtc
atcgagttcggccccgaccagccgagttaccggaagctgctgcagttggtcgaagagctc
cgcgacgtcgtgttcaaaggcatcgaggaggtcacccgcgtcgtcatccgcaaggagaag
accgacgacggcgaggagttcgtcctctacaccgaggggtcggcgttcggcgacgtgctc
gccatcgagggcgtcgacgcgtcgcggacgacgtgtaacaacatccacgagatccaccgc
aacctcggcgtcgaggccgcgcgcgaggccatcatcaacgagacgatggagacgctcgaa
gagcagggtctcgacgacgtgaacgtccgacacctgatgctcgtcgcggacatcatgacg
aaccgcgggaccatcgagtccatcggccgtcacggtatctccgggtcgaaggagtcggta
ctcgcccgcgcggcgttcgaggtgacggtgaaccacctgctcgacgccgccatccacggc
gaagaggacgacctcaacggcgtcatcgagaacgtcatcgtcggcaagccggtcgccatc
ggcaccggcgacgtcgacctccggatgggctcgttcagcgcgaacaccgaacagccctcg
gacgactag
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