Haloprofundus sp. MHR1: FCF25_09665
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Entry
FCF25_09665 CDS
T05952
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCF25_09665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halm03400
]
FCF25_09665
Enzymes [BR:
halm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FCF25_09665
DNA repair and recombination proteins [BR:
halm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FCF25_09665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
QCJ47366
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All DBs
Position
1909731..1910600
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AA seq
289 aa
AA seq
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MRVGAHVSISSSKATSDSVTPPHENIANAVFRQKEVGGNCGQIFTHSPQVWKHQEITDED
AATFREETEAELDGPWVIHSSYLVNLCTPKDGLREKSIDSMQKEVDAAARLGVEYVNVHL
GAHTGAGVEQGLENAASALDELDVPDGVTVLVESDAGSGTKLGGDFEHLATVIEKADLDI
DVCLDTAHAFAAGYDLSTAEGVDDTVAAFDDEIGLEHLKCVHLNDSKHECGTNKDEHAHI
GEGYIGEDGMNAFVNHPDLAEVPLVLETPNEAEKGFEWDIARVKELREN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttggagcacacgtctcaatatctagctcaaaagcgactagtgactcggtgacc
cctcctcacgaaaatatagcaaacgctgtattccgtcaaaaggaggtgggtggtaactgc
ggacaaatattcacccactcaccgcaggtatggaagcaccaagagataaccgacgaagac
gccgcgacgtttcgcgaagagacagaagccgagttggacggcccgtgggttatccactcg
tcgtacctcgtcaacctctgcacgccgaaggacggactccgcgagaaatccatcgactcg
atgcagaaggaggtcgacgccgcggcccgactcggcgtcgagtacgtcaacgtccacctc
ggcgcgcacaccggcgcgggcgtcgagcagggcctcgaaaacgcggcgtcggcgctggac
gaactcgacgtgcccgacggcgtgacggtgctcgtcgagagcgacgccggcagcggcacc
aaactcggcggcgacttcgagcacctcgccaccgtcatcgagaaggccgacctcgacatc
gacgtctgtctcgacaccgcccacgcgttcgccgcgggctacgacctctcgacggccgag
ggcgtcgacgacaccgtcgccgccttcgacgacgaaatcggcctcgaacacctgaagtgc
gtccacctgaacgactcgaaacacgagtgcgggacgaacaaggacgaacacgcccacatc
ggcgagggctacatcggcgaagacggcatgaacgcgttcgtcaaccacccggacctcgcc
gaggtgccgctggtgctggagacgcccaacgaggccgagaaagggttcgagtgggacatc
gcccgcgtgaaggaactgcgcgagaactga
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