Haloprofundus sp. MHR1: FCF25_10835
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Entry
FCF25_10835 CDS
T05952
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FCF25_10835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halm03021
]
FCF25_10835
Transcription machinery [BR:
halm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FCF25_10835
Prokaryotic type
Archaeal type
TFB
FCF25_10835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QCJ47582
LinkDB
All DBs
Position
complement(2149069..2150040)
Genome browser
AA seq
323 aa
AA seq
DB search
MAGPTRERRRERRRARGDRSAETEADADELDDIDPDDLVRTADGDLIHEETGLVVEEQNI
DRGPEWRAFNHSERQSKSRVGAPITETMHDKGLTTTIDWKDKDAYGRSLSSEKRSQMHRL
RKWQERIRTKDAGERNLQFALSEIDRMSSALGVPRSVREVASVIYRRALKEDLIRGRSIE
GVSTSALYAACRQEGIPRSLEEVSEVSRVERKEIGRTYRYVSQELGLELKPVDPKQYVPR
FASALDLSEEVQGKANEIIDETAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADV
AQVTEVTIRNRYQEQIEAMGIPS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacccactcgtgagcggcggcgcgagcggcgacgggcgcgaggcgaccggtcg
gccgaaacggaggccgacgcggacgaactcgacgacatcgaccccgacgacctcgtccgg
acggcggacggggacctcatccacgaggagacgggactggtcgtcgaagaacagaacatc
gaccgcgggccggagtggcgggcgttcaaccactccgagcgccagtcgaagtcccgcgtc
ggcgcgccgatcaccgagacgatgcacgacaaggggttgacgacgaccatcgactggaag
gacaaggacgcctacgggcgctcgctctcctcggagaagcgtagtcagatgcaccgactg
cgcaagtggcaggagcgcatccgaaccaaggacgccggcgaacgaaacctgcagttcgcg
ctcagtgaaatcgaccgcatgtcgtcggcgctcggcgtccctcgatccgttcgggaggtt
gcgtcggtcatctaccgccgcgcgctgaaagaggacctcatccgcgggcgctccatcgag
ggcgtctcgaccagcgcgctgtacgccgcctgccggcaggaggggattccccggagcctc
gaagaggtctcggaggtctcgcgcgtcgagcggaaggagatcggccgaacctaccgctac
gtctcgcaggaactcggtctggagctgaaacccgtcgacccgaaacagtacgtcccgcgc
ttcgcctccgcgctcgacctctccgaggaagtccaggggaaggccaacgagataatcgac
gagacggcggaacagggtctcctctcgggcaagtcgccgactggttacgcggcggcagct
atctacgcggcgtcgcttctctgtaacgagaagaagacccagcgcgaggttgccgacgtc
gcgcaggtgaccgaggtcaccatccgcaaccgataccaggaacagatcgaagcgatgggc
attccgagttaa
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integrated database retrieval system
