Haloprofundus sp. MHR1: FCF25_11080
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Entry
FCF25_11080 CDS
T05952
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halm03000
]
FCF25_11080
Transcription factors [BR:
halm03000
]
Prokaryotic type
Helix-turn-helix
Other families
FCF25_11080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
MarR
HTH_Crp_2
HVO_A0261_N
HTH_45
HTH_20
Mnd1
HTH_IclR
HTH_5
HTH_11
HVO_A0114
TrmB
SMC_ScpB
Fe_dep_repress
HTH_27
AbiEi_4
Rrf2
DUF7343
HTH_13
GntR
HTH_Cmi2_C
wHTH-PRTase_assc
HTH_28
Mrr_N
Rio2_N
HTH_23
RdfA
EutK_C
Motif
Other DBs
NCBI-ProteinID:
QCJ47628
LinkDB
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Position
2191921..2192709
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AA seq
262 aa
AA seq
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MSDALRDKRTATRFRILAEIADRQPAVSQGEIASAVGVTSQAVSEYIRELVDEGLVDKEG
RSRYRVTKEGVDWLFREAKSLRRYAEHVTEDVLESVQEDAAIATADVEAGDPVSLSIRGG
LLHATPGDEGPATGVATTDAEAGTDVGVTGFEGVIEMDTGSVTVVQVPAVRTGGSRVVDA
DALADRCAGADIVVAAGVEATVALRSAGVEPAVTVAAGEVAAGAAARGQSVLVVATMDAV
GRVTDALRDEDISHEVTELASR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccctgcgggacaaacgcacggccacgcgatttcgaatcctcgccgagatc
gcggaccggcaaccggcggtgagccagggcgagatcgcctcggcggtcggcgtcaccagc
caagccgtctccgagtacatccgcgaactcgtcgacgagggactcgtcgacaaggagggt
cggtcgcgctaccgcgtgacgaaggagggcgtcgactggctctttcgggaggcgaaatcg
ctgcgacgctacgccgaacacgtgaccgaggacgtcctcgagagcgtccaggaagacgcc
gccatcgccaccgccgacgtcgaagccggcgaccccgtctcgctgtccatccgcgggggg
ctactgcacgcgacgccgggcgacgaggggccggcgacgggcgtcgcgacgaccgacgcc
gaggcggggaccgacgtgggcgtcaccgggttcgagggcgtcatcgagatggacaccggg
agcgtcaccgtcgtccaggtcccggcggttcggacgggcggcagtcgcgtcgtcgacgcg
gacgcgctcgccgaccgctgcgccggcgccgacatcgtcgtcgccgcgggcgtcgaagcg
accgtcgcgctccgttcggcgggcgtcgaacccgcggtcaccgtcgccgcgggcgaagtc
gctgccggcgctgcagcgcgcggacagtccgttctcgtcgtcgccacgatggacgccgtc
ggccgcgtcaccgacgcgctccgggacgaggacatctctcacgaggtcaccgaactcgcc
agccgctga
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