Haloprofundus sp. MHR1: FCF25_11695
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Entry
FCF25_11695 CDS
T05952
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm00300
Lysine biosynthesis
halm00470
D-Amino acid metabolism
halm01100
Metabolic pathways
halm01110
Biosynthesis of secondary metabolites
halm01120
Microbial metabolism in diverse environments
halm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FCF25_11695 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FCF25_11695 (dapF)
Enzymes [BR:
halm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FCF25_11695 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
acVLRF1
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QCJ47742
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Position
2314421..2315320
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AA seq
299 aa
AA seq
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MSPALDHTVSFEKYHGTGNDFVVVDATDSVPYRGRFAEAHCDRDTGVVDESGVHDRRGAD
GVLFLALEDRFHPPRIVMTLVQPDGSVAAMCGNGARCAAAWAAARTDASEFMIDTQSGTK
RAVVRDGPGDDSADITVEMGRPTFDPRDVPLAADRDGELVAEEVEGLEVTAVNTGVPHAV
AFVEDVADVDLEAVAPAVRHADAFPEGANVTLASRDEDGGFSQRTFERGVEGETRSCGTG
AVAVVAAAKRLGLVEGDDPIRVSPPGGDLEITVPDRGGATLRGPVEAEYEGRLAALPER
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcccagcactcgaccacaccgtatcgttcgaaaagtaccacgggaccggcaacgac
ttcgtcgtcgtcgacgcgaccgactcggttccgtaccgcggtcggttcgccgaggcgcac
tgcgaccgcgacactggcgtcgtcgacgagagcggcgtccacgaccggcgcggcgcggac
ggcgtcctcttcttggcgctcgaagaccggttccatccgcccagaatcgtgatgacgctc
gtccagcccgacggctccgtcgccgcgatgtgcggcaacggcgcgcgctgtgcggcggcg
tgggcggccgcccgaaccgacgcctcggagttcatgatcgacacccagtcgggcaccaag
cgcgccgtcgtccgcgacggcccgggcgacgactcggccgacatcaccgtcgagatggga
cgcccgacgttcgacccgcgggacgtgccgctggcggccgaccgcgacggcgaactcgtc
gccgaggaggtcgagggtctcgaagtcacggcggtgaacaccggcgttccgcacgccgtc
gcgttcgtcgaggacgtggctgacgtggacctcgaagccgtcgcgcccgcggtccgtcac
gccgacgccttccccgaaggcgcgaacgtgacgctggcctcccgcgacgaggacggcggt
ttcagccagcgcaccttcgaacggggcgtcgagggcgagacgcgttcctgcgggacgggc
gcggtcgccgtcgtcgctgccgcgaagcgtctcggtctcgtcgagggcgacgacccgatt
cgcgtctcgccgccgggcggcgacctcgaaatcacggtgcccgaccgcggcggcgcgacg
ctccgcggtcccgtcgaggcggagtacgagggtcgactcgccgcgcttccggagcggtga
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