KEGG   Haloprofundus sp. MHR1: FCF25_14280
Entry
FCF25_14280       CDS       T05952                                 
Name
(GenBank) DNA mismatch repair protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
halm  Haloprofundus sp. MHR1
Pathway
halm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:halm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    FCF25_14280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halm03400]
    FCF25_14280
DNA repair and recombination proteins [BR:halm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     FCF25_14280
SSDB
Motif
Pfam: MutS_V HHH_5 Apolipoprotein AAA_21 IMS_HHH AAA_14 UBA_HYPK AAA_23 AAA_29 AAA_28 ABC_tran
Other DBs
NCBI-ProteinID: QCJ48218
LinkDB
Position
complement(2812895..2814643)
AA seq 582 aa
MRLQEYWGVGPKTSERLQETLGVAAAVEAIESADVRALTEAGIPAGRATRILRRANGDAG
MATLGTRDARSVYDELLSLAGDHAVTRHAGDRIRVLTPLPERAARDARLDEIEAAREVWA
ELDADARDRVLAAFAAYDESGGTERAAVETALTLRDIGLDTGPFAPLADVDEAALSEAVG
ALGHVDGDDVLDGTDEKLDRLRDQLDAAERLESGAFDLLETVREAGARNLDDFEHAVADY
VAAETELSREDVLGAAADDPVDAADFVSTTLRALAADLRERVDEREETVAADLRETIEAA
RDDIDAAVEAVEDSAFAVSLARFAEAYDLVRPELGGDDGPFGVAAVDARHLLLDDDVQPV
TYAVGHHTLSAEPQPPADERVTVLTGANSGGKTTLLETLCQVALLAAMGLPVPASRAQVG
DFDTVVFHRRHASFNAGVLESTLKSIVPPLSGEGRTLMLVDEFEAITEPGRAADLLGGLV
GLTVDRNAVGVYVTHLAEDLSPLPAAARIDGIFAEGLTPDLKLRVDYQPRFGTIGKSTPE
FIVSRLVANAKDNVERQGFQTLAAAVGEEAVQQTLSDARWRE
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgcgactgcaggagtactggggagtcggaccgaagacgagcgagcgactacaggagacg
ctcggcgtcgccgccgccgtcgaggccatcgaatccgccgacgtgcgagcgttgaccgaa
gccggaatccccgccggacgcgcgacgcgcatcctccggcgtgccaacggcgacgctggg
atggcgacgctcgggacgcgcgacgcccgctcggtctacgacgagttactctcgctggcg
ggcgaccacgcggtgacgcgccacgcgggcgaccgaatccgcgtgctcacgccgctgccg
gagcgcgccgcccgcgacgcgcgactcgacgaaatcgaggccgcgcgggaggtgtgggcc
gagttggacgccgacgcccgcgaccgggtgctcgccgccttcgccgcctacgacgagtcg
ggcggcaccgagcgcgccgccgtcgaaaccgcgctcaccctgcgcgacatcggtctcgac
accggaccgttcgcgccgctcgccgacgtcgacgaagcggcgctctcggaggccgtcggc
gcgctcggtcacgtcgacggcgacgacgtactcgacggtaccgacgagaagctcgaccgc
ctccgcgaccagttagacgccgcagagcgcctcgaatccggcgcgttcgacctcctggag
acggtccgagaggcgggcgcgcgcaaccttgacgacttcgagcacgcggtggcggactac
gtcgccgccgagacggagctctctcgcgaggacgtcctcggcgcggcggccgacgacccc
gtcgacgccgccgacttcgtcagcaccacccttcgcgcgctcgcggcggacctccgcgag
cgggtcgacgagcgcgaggaaactgtcgccgccgacctccgcgagaccatcgaggccgcc
cgcgacgacatcgacgccgccgtcgaggcggtcgaggacagcgcgttcgctgtctcgctg
gcgcgcttcgccgaggcgtacgacctcgtccgccccgaactgggcggggacgacggcccc
ttcggcgtcgccgccgtcgacgcgcggcatctgttgttggacgacgacgtgcaaccggtg
acgtacgccgtcggccaccacaccctctcggcggagccgcaaccgcccgcggacgaacgg
gtgaccgtcctgacgggcgcgaactccggcgggaagacgacgctgttggagacgctgtgt
caggtggcgcttctggccgcgatgggcctgcccgtcccggcgagtcgagcgcaggtcggc
gacttcgacaccgtcgtcttccaccgccgtcacgcgagcttcaacgccggcgtgctggag
tcgacgctgaaatctatcgtcccgccgctgtcgggcgaggggcggacgctgatgctcgtc
gacgagttcgaggccatcaccgaaccgggtcgggcggcggatctgctgggcgggctcgtc
ggactgaccgtcgaccgaaacgccgtcggcgtctacgtcacccacctcgcggaggacctg
agtccgttgcccgctgccgcgcgcatcgacggcatcttcgcggagggactgacgcccgac
ctgaagctccgcgtcgactaccaaccgcggttcggcacgatcgggaaatcgacgccggag
ttcatcgtctcgcgactcgtcgcgaacgcgaaggacaacgtcgagcgacagggctttcag
acgctcgcggcggccgtcggcgaggaggcggtccaacagacgctgtcggacgcgcgctgg
cgggagtga

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