Haloprofundus sp. MHR1: FCF25_14280
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Entry
FCF25_14280 CDS
T05952
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FCF25_14280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halm03400
]
FCF25_14280
DNA repair and recombination proteins [BR:
halm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FCF25_14280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
HHH_5
Apolipoprotein
AAA_21
IMS_HHH
AAA_14
UBA_HYPK
AAA_23
AAA_29
AAA_28
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QCJ48218
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Position
complement(2812895..2814643)
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AA seq
582 aa
AA seq
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MRLQEYWGVGPKTSERLQETLGVAAAVEAIESADVRALTEAGIPAGRATRILRRANGDAG
MATLGTRDARSVYDELLSLAGDHAVTRHAGDRIRVLTPLPERAARDARLDEIEAAREVWA
ELDADARDRVLAAFAAYDESGGTERAAVETALTLRDIGLDTGPFAPLADVDEAALSEAVG
ALGHVDGDDVLDGTDEKLDRLRDQLDAAERLESGAFDLLETVREAGARNLDDFEHAVADY
VAAETELSREDVLGAAADDPVDAADFVSTTLRALAADLRERVDEREETVAADLRETIEAA
RDDIDAAVEAVEDSAFAVSLARFAEAYDLVRPELGGDDGPFGVAAVDARHLLLDDDVQPV
TYAVGHHTLSAEPQPPADERVTVLTGANSGGKTTLLETLCQVALLAAMGLPVPASRAQVG
DFDTVVFHRRHASFNAGVLESTLKSIVPPLSGEGRTLMLVDEFEAITEPGRAADLLGGLV
GLTVDRNAVGVYVTHLAEDLSPLPAAARIDGIFAEGLTPDLKLRVDYQPRFGTIGKSTPE
FIVSRLVANAKDNVERQGFQTLAAAVGEEAVQQTLSDARWRE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcaggagtactggggagtcggaccgaagacgagcgagcgactacaggagacg
ctcggcgtcgccgccgccgtcgaggccatcgaatccgccgacgtgcgagcgttgaccgaa
gccggaatccccgccggacgcgcgacgcgcatcctccggcgtgccaacggcgacgctggg
atggcgacgctcgggacgcgcgacgcccgctcggtctacgacgagttactctcgctggcg
ggcgaccacgcggtgacgcgccacgcgggcgaccgaatccgcgtgctcacgccgctgccg
gagcgcgccgcccgcgacgcgcgactcgacgaaatcgaggccgcgcgggaggtgtgggcc
gagttggacgccgacgcccgcgaccgggtgctcgccgccttcgccgcctacgacgagtcg
ggcggcaccgagcgcgccgccgtcgaaaccgcgctcaccctgcgcgacatcggtctcgac
accggaccgttcgcgccgctcgccgacgtcgacgaagcggcgctctcggaggccgtcggc
gcgctcggtcacgtcgacggcgacgacgtactcgacggtaccgacgagaagctcgaccgc
ctccgcgaccagttagacgccgcagagcgcctcgaatccggcgcgttcgacctcctggag
acggtccgagaggcgggcgcgcgcaaccttgacgacttcgagcacgcggtggcggactac
gtcgccgccgagacggagctctctcgcgaggacgtcctcggcgcggcggccgacgacccc
gtcgacgccgccgacttcgtcagcaccacccttcgcgcgctcgcggcggacctccgcgag
cgggtcgacgagcgcgaggaaactgtcgccgccgacctccgcgagaccatcgaggccgcc
cgcgacgacatcgacgccgccgtcgaggcggtcgaggacagcgcgttcgctgtctcgctg
gcgcgcttcgccgaggcgtacgacctcgtccgccccgaactgggcggggacgacggcccc
ttcggcgtcgccgccgtcgacgcgcggcatctgttgttggacgacgacgtgcaaccggtg
acgtacgccgtcggccaccacaccctctcggcggagccgcaaccgcccgcggacgaacgg
gtgaccgtcctgacgggcgcgaactccggcgggaagacgacgctgttggagacgctgtgt
caggtggcgcttctggccgcgatgggcctgcccgtcccggcgagtcgagcgcaggtcggc
gacttcgacaccgtcgtcttccaccgccgtcacgcgagcttcaacgccggcgtgctggag
tcgacgctgaaatctatcgtcccgccgctgtcgggcgaggggcggacgctgatgctcgtc
gacgagttcgaggccatcaccgaaccgggtcgggcggcggatctgctgggcgggctcgtc
ggactgaccgtcgaccgaaacgccgtcggcgtctacgtcacccacctcgcggaggacctg
agtccgttgcccgctgccgcgcgcatcgacggcatcttcgcggagggactgacgcccgac
ctgaagctccgcgtcgactaccaaccgcggttcggcacgatcgggaaatcgacgccggag
ttcatcgtctcgcgactcgtcgcgaacgcgaaggacaacgtcgagcgacagggctttcag
acgctcgcggcggccgtcggcgaggaggcggtccaacagacgctgtcggacgcgcgctgg
cgggagtga
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