Haloprofundus sp. MHR1: FCF25_14785
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Entry
FCF25_14785 CDS
T05952
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halm03032
]
FCF25_14785 (gyrB)
03400 DNA repair and recombination proteins [BR:
halm03400
]
FCF25_14785 (gyrB)
Enzymes [BR:
halm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FCF25_14785 (gyrB)
DNA replication proteins [BR:
halm03032
]
Prokaryotic type
DNA Topoisomerases
FCF25_14785 (gyrB)
DNA repair and recombination proteins [BR:
halm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FCF25_14785 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QCJ48313
UniProt:
A0A4D7H263
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All DBs
Position
2923683..2925599
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AA seq
638 aa
AA seq
DB search
MSQDSEYGAGQIQVLEGLQAVRKRPAMYIGSTDVRGLHHLVYEVVDNSIDEALAGHCDAI
EVTIHDDGSVSVSDNGRGIPVDTHEQYERPAVEVIMTVLHAGGKFDNKSYQVSGGLHGVG
VSVVNALSHWLEVEIKRDGGVWKHRFDRGEPEQGEFERVRDLDPDESTGTTIQFWPDSDI
FETTEFDFSTLATRLRELAFLNSGVEITLTDERSDDSETFYYDGGIREFVEYLNETKTAL
HDDVVYFEDEDQNIQVEVAMQATDELQGSIHAFANNINTREGGTHLTGFKTALTRVVNDY
ASKQGLIDDLDDNLRGEDVREGLTAVISVKHPDPQFEGQTKTKLGNSEVRGIVESATHKR
LSTYFEENPGTAQAIIRKAAEAAKARKAAKKAEELTRRKSALESTALPGKLADCQTRDPA
ESELFIVEGDSAGGSAKQGRDRHNQAILPLRGKILNVEKHRLDRILENNEVRALITAIGA
GIGEEFDIENARYHKIILMTDADVDGAHIRTLLLTLLYRHMKPLLEAGYVYAAQPPLYRI
RYRGETYDAMTEEERERIVEEKCNGNPTRIQRFKGLGEMNPEQLWETTMEPENRILKQIT
IEDAAQADRMFNVLMGDAVEPRKQFIKDHATDAEWVDI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagacagcgagtacggcgccgggcagattcaggtcctcgagggcctgcaagcc
gtccggaaacgtccggcgatgtacatcggttctacagacgttcgtggactccaccatctc
gtctacgaagtcgtcgacaactccatcgacgaagccctcgcgggccactgtgacgctatc
gaggtgacgattcacgacgatggctcggtgtcggtctccgacaacggccggggtatcccg
gtcgacacccacgaacagtacgagcgtccggcggtcgaggtcatcatgaccgtcctccac
gccggcgggaagttcgacaacaaatcctaccaggtctccggcggcctccacggcgtcggc
gtctccgtcgtcaacgcgctctctcactggctcgaggtcgagatcaagcgcgacggcggc
gtctggaagcaccgcttcgaccggggcgaacccgaacaaggcgagttcgagcgcgtccgc
gacctcgaccccgacgagagcaccggaaccaccatccagttctggcccgactccgacatc
ttcgagacgacggagttcgacttctcgacgctcgccacccgtctccgcgaactcgccttc
ctcaactccggcgtcgaaatcacgctcaccgacgagcgctccgacgactcggagacgttc
tactacgacggcggcatccgcgagttcgtcgagtacctcaacgagacgaagaccgcactt
cacgacgacgtcgtctacttcgaagacgaggaccagaacatccaggtcgaagtcgccatg
caggcgaccgacgagctgcagggctccatccacgccttcgccaacaacatcaacacccgc
gagggcggtacccacctcaccgggttcaagacggcgctcacccgcgtcgtcaacgactac
gcgagcaagcagggactcatcgacgacctggacgacaacctccgcggcgaggacgtccgc
gagggactcaccgcggtcatctccgtcaaacaccccgacccgcagttcgaggggcagacg
aagacgaagctcggcaactccgaggtccgaggaatcgtcgagagcgcgacgcacaaacgc
ctctcgacgtacttcgaggagaacccgggaacggcgcaggcgataatccgcaaggccgcc
gaggccgccaaagcccggaaagccgcgaagaaggccgaagagctgacgcgccgcaagagc
gcgctcgaatcgacggcgctgcccggcaaactcgccgactgtcagacccgcgaccccgcg
gagtccgaactgttcatcgtcgagggtgactccgccggcgggagcgccaaacagggccgc
gaccggcacaatcaggccatcctcccgctccgcgggaagattctcaacgtcgagaagcac
cgtctcgaccggattctggagaacaacgaggtgcgcgcgctcatcaccgccatcggcgcg
ggcatcggcgaggagttcgacatcgagaacgcccgctaccacaagatcatcctgatgacc
gacgccgacgtcgacggcgcgcacatccgtactttgctcctcacgcttctgtaccgtcac
atgaagccgcttctggaggccggctacgtgtacgcggcgcaaccgccgctgtaccgcatc
cgctaccgcggcgagacgtacgacgcgatgacggaggaagaacgcgagcgcatcgtcgaa
gagaagtgcaacggcaacccgacgcgcatccagcggttcaaggggctcggcgagatgaac
cccgagcagctgtgggagacgacgatggagcccgagaaccgcatcctcaaacagataacc
atcgaggacgccgcccaggccgaccgcatgttcaacgtgctgatgggcgacgccgtcgaa
ccgcgaaaacagttcatcaaagaccacgccaccgacgcagagtgggtggacatttaa
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