Halolamina sp. CBA1230: B4589_001100
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Entry
B4589_001100 CDS
T06651
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
haln
Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_001100
Enzymes [BR:
haln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B4589_001100
DNA repair and recombination proteins [BR:
haln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B4589_001100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
AAA_22
Viral_helicase1
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QKY19036
UniProt:
A0A7D4Y5E3
LinkDB
All DBs
Position
complement(206213..209704)
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AA seq
1163 aa
AA seq
DB search
MTDKESADDGNGYRRLEDAQAEIRDAFFAADSGLFVLDCGPGSGKSVTADSIAAEDLARK
AQAGVDSPAETLCLTSFSRDDAASILPGVERALRGLADDPEAPVDLDAETAAELGTALRG
SDRVGTIDSVLGAVFDAVAGEVGFDEVPEVGDSAALAGVHGDALDVVRSDTSLAEPLATL
DDAYPGGRYDADTADLLAAARGACRERRLSVPELRDRLEAVAEGTYPDGPPESLEDVLRD
AERFFGAEEREAVERELEGEGSDAVVDADADCHDRWFAAIDALCTVLPAYLDAYDEACRA
AGVVAHVDVAHWVATFFEAADYESAFRERLRERWTDRLSTVIVDEAQDVSRAQHDALAPL
VDADTRVLLVGDREQCIYAWRNAQPSLFDQAATEGRYFGVDWEPHERRTATRSYRFRPSI
AAAIDTVFDPVFTDSTRGAADAAAASGQEIEGYDHLSAVREPTSDPNVHVAAFAEHGRPG
SPTWVDPEEGLGEAEALADCIATGLESGRFDRDDGEDPGVTVLFHRRTHMDTYVDAFADA
GLSVRDASRALFGHPLVGAVSAVVDWLRAPTTQEATLRLVNDDDLPIDGLVDRLMRSDWS
IGSVAESESMRGTKGAVVDGLADLANRRADHLAMAGADVVGDVIETLSLAEDPLDQSATA
ADDEAVLDRLVGVVADWEGDRTYSLAELATALDHARRNPKSGPSLPTAAEADVTFRTIHG
AKGDEDDVVAVADLGTGLGRYGAYLDRFVAHGRHVALAPPEPAVGDDSPDLGGTVLAGGP
YDPDASPGDGSAGLRWASEAWVDGDPPRLAGPPPLRAPVAAARAERWRLLYVALSRARDH
LVLPLPGRRSAPTPRDRWVDTLRETLSFDADREGEYTVETPGDHDPLTVAVHRADGENPT
STAEESAADGTDRPDPLPERGWTPRFINPSTVYELSAAPEEGVLAHLSGQPLHAEQDGVT
VPLPFETMGPEVVGDVAHDVFATALSAGVDADTLRDCGGPLPVALDRAIDDHARGVAPDE
REQLRRYVEGTLCPQLAGTESYERLAASERRHVEEPLDAVVRVEGLAVEIGGRADVVSVA
ADSEWHVDELKVGLRPPEPELRERYELQAATYAWLLERQGPESVTATVTTVGAHEERTTV
DAGEDDVRDLLDRLADRRWNCQR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaggagtcggccgacgacgggaacggctaccggcggctcgaagacgctcag
gccgagatccgcgacgcgttcttcgcggcggactcgggactgttcgtgctcgactgcgga
ccgggatcgggtaaatccgtcaccgccgacagtatcgccgcggaggacctcgcacgcaag
gcgcaggcgggggtcgacagccccgcggagacgctctgtctcacctcgttctcccgggac
gatgcggcgagcatcctccccggcgtcgaacgcgcgctccgagggctcgccgacgacccc
gaggcgccggtggacctggacgccgagacggcggcggaactggggaccgcgctccgcggg
agcgaccgcgtcggcaccatcgacagcgtgctcggggcggtgttcgacgccgtcgcgggc
gaggtcgggttcgacgaggtgccggaagtcggggatagtgccgcgctcgcgggtgttcac
ggtgatgcgctcgacgtggttcggagcgatacgtcgctggcggagccgctcgcgacgctc
gacgacgcctaccccggcgggcgctacgacgccgacacggccgacctgttggctgcggcg
cggggcgcctgccgggagcgtcggctctcggttccggagctccgcgatcggctggaagcc
gtagccgaaggaacgtaccccgacggtccgcccgagtcactggaagacgtcctgcgtgac
gccgagcgcttcttcggtgccgaggagcgcgaagcagtcgaacgggaactggagggggaa
gggtcggacgcggtcgtcgatgcggacgccgactgccacgaccgctggttcgcggcaatc
gacgcgctctgtacggtgctgcccgcctacctcgacgcctacgacgaagcgtgccgggcg
gccggcgtggtcgcccacgtcgacgtcgcccactgggtcgcgacgttcttcgaggccgcc
gactacgagagcgcgttccgggagcgcctgcgagagcgctggaccgaccggctctcgacg
gtgatcgtcgacgaggcacaggacgtctcccgcgcccagcacgacgcgctcgcgccgttg
gtcgacgccgacacgcgggtcctgctggtgggcgaccgcgagcagtgtatctacgcctgg
cgaaacgcccagccgagcctgttcgaccaggccgcgacggaaggtcgatacttcggcgtc
gactgggagccccacgaacggcggactgcgaccagatcctaccgcttccgtccgtcgatc
gccgcggcgatcgacaccgtgttcgacccggtgttcacggactccacccggggagctgct
gacgcggcagcggcgtccggccaggagatcgaagggtacgaccacctctccgccgtccgc
gagccgacatccgacccgaacgtccacgtcgccgccttcgccgagcacggccgtcccgga
tcgccgacatgggtcgaccccgaggaggggctgggcgaggccgaggccctcgccgactgc
atcgcgacggggctcgaatcgggacggttcgaccgcgatgacggtgaagatccgggcgtg
acggtgttgttccaccgccgaacgcacatggacacgtacgtcgacgcgttcgccgacgcc
ggtctctcggtgcgggacgccagccgcgcgctgttcggccacccgctcgtgggcgcggtc
agtgcggtggtcgactggctccgcgcacccacgacgcaggaagcgaccctcagactggtc
aacgacgacgacctgccgatcgacgggctggtcgaccgactcatgcgctcggactggtcg
atcgggagcgtcgccgagtccgagtcgatgcgggggacgaagggagcggtcgtcgacgga
ctcgccgacctcgcgaaccggcgtgccgaccacctcgcgatggcgggcgcggacgtggtg
ggcgacgtgatcgagacgctctcgctggccgaggacccgctcgaccagagcgcgaccgcc
gctgacgacgaggccgtcctcgaccgactggtcggcgtcgtcgccgactgggagggcgac
cggacgtactcgctggccgaactcgcgacggcgctggatcacgcgcgccggaaccccaag
agcgggccgagcctcccgaccgccgccgaggccgacgtgaccttccgcacgatccacggc
gcgaaaggcgacgaggacgacgtagtcgcggtggcggacctcggcaccgggctgggtcgc
tacggcgcctacctcgaccggttcgtcgcgcacgggcgccacgtcgcgctcgcgccgccg
gagccggcggtcggcgacgactcccccgacctcggcgggacggtgctcgccggcggcccg
tacgaccccgacgcctcccccggcgacggcagcgcgggcctgcgctgggcgagcgaggcg
tgggtcgacggtgatccgccacggctcgccggcccgccgccgctccgagcgccggtcgcg
gccgcgcgcgccgagcgctggcgcctgctgtacgtcgcgctctcgcgggcgcgggaccac
ctcgtgctcccgctccccggccggcgttccgcgccgacgccgcgggaccgctgggtcgac
accctccgggagacgctctcgttcgacgccgaccgcgagggcgagtacaccgtcgagacg
cccggcgaccacgacccgctgactgtcgccgtccatcgcgcggacggtgagaacccgacg
tcgacggcggaagagtcggccgccgacgggacggaccgcccggacccacttcccgaacgt
ggctggacgccgcgtttcatcaacccgagtacggtgtacgaactctccgcggcgccggag
gagggcgtgctcgcccacctcagcggccagccgctccacgccgagcaggacggcgtcacg
gtgccgctgccgttcgagacgatggggccggaggtcgttggcgacgtggcccacgacgtg
ttcgcgaccgcactctcggcgggcgtcgacgccgacacgctccgtgattgtggcggtccg
ctccccgtagcgctggatcgggcgatcgacgatcacgcccgcggtgtcgcgcccgacgag
cgcgagcagttgcgccgctacgtcgagggaacgctctgcccgcagctggcgggcacggag
agctacgaacggctggcggcaagcgagcggcgccacgttgaggagccgctggacgccgtg
gttcgtgtcgagggactggccgtcgaaatcggcggccgggcggacgtcgtctcggttgcc
gccgacagcgagtggcacgtcgacgaactcaaagtcgggctgcgcccgcccgagcccgag
ctccgggagcgctacgaactccaggcggcgacgtacgcctggctcctcgagcgacaggga
ccggagtcggtgactgcgacagtgacgaccgtgggtgcgcacgaggagcgcaccaccgtc
gacgcgggggaggacgacgtccgcgacctgctcgatcggctcgccgaccgtcgctggaac
tgccagcggtag
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integrated database retrieval system
