KEGG   Halolamina sp. CBA1230: B4589_001920
Entry
B4589_001920      CDS       T06651                                 
Name
(GenBank) DNA mismatch repair protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
haln  Halolamina sp. CBA1230
Pathway
haln03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    B4589_001920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:haln03400]
    B4589_001920
DNA repair and recombination proteins [BR:haln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     B4589_001920
SSDB
Motif
Pfam: MutS_V HHH_5 DUF7409 AAA_21 AAA_28 IMS_HHH Catalase-rel ABC_tran AAA_14
Other DBs
NCBI-ProteinID: QKY19192
UniProt: A0A7D4YFH5
LinkDB
Position
complement(365582..367348)
AA seq 588 aa
MRLQEYWGVGPKTADLLEAELGVERAVRAIESADVSTLVDAGLPRGRATRILRRATGAAG
LDTLGTGDARDVYGDLLELAAGDALTGGAADRIRVLTPLSSHEAAAERLDRIDQAREVWT
GLDDDGRESVIDAFAGYDDAGGGRRAAVEAALELRAVGSSEGGPFERLADLDADGLEDAV
DALAAVEGEFGDEDEPLSVGEGADERLDELRTQLAAARRLNDAALDVLETVRGQGVRSLE
AFQSAVISYVAEETGVTAGEIRSVAPDEARDETDFVSATLRALVADLEGQVADREAAVAA
DLRETLDDAGEGIEAAVDAVDELAFDLSLARFAAKHDLTRPELVEDGLAVRGARNLFLDG
DVQPVTYGVGTHSVAGDDADPPSGDRVAVLTGANSGGKTTLLETLCGVALLASMGLPVPA
EDAEVGRFDTVVFHRRHASFNAGVLESTLRSVVPPLTGEGRALMLVDEFEAITEPGRAAD
LLNGLVDLTVDRGALGVFVTHLAEDLSPLPGAARVDGIFAEGLTDELDLRVDYQPRFGTV
GRSTPEFIVSRLVANAGDRDERAAFRSIAAAVGEEAVQRTLSDAEWSP
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgcgactgcaggagtactggggcgtcggcccgaagacggccgacctgctcgaagccgag
ttgggcgtcgagcgtgcggttcgcgccatcgagtctgcggacgtgagcacgctggtcgac
gccggcctgccacgggggcgcgcgacgcgcatcctccggcgggcaacgggggcggcgggg
ctggacacgctgggcaccggcgacgcccgcgacgtgtacggcgacctgctcgaactcgcg
gcgggcgacgcgctgaccggcggggccgccgaccggatccgcgtgctcacgccgctgtcg
agccacgaggccgcagccgaacggctcgaccgcatcgaccaggcacgcgaggtgtggacc
ggcctcgacgacgacggccgggagtcggtgatcgacgcgttcgccggctacgacgacgcc
ggcggcggccgccgcgcggccgtggaagcggcgctcgaactccgggcggtcggtagcagc
gagggcggcccgttcgagcgactggccgatctggatgccgacgggctcgaggacgcggtg
gacgcgctcgcggcggtcgagggtgagttcggcgacgaggacgagccgctctcggtcggc
gagggggcggacgaacgcctcgacgaactccggacccagctggccgccgcgcggcgactg
aacgacgcggcgctcgacgtgctggagaccgtccgcggacagggcgtacgctcgctggag
gcgttccagagcgcggtgatctcctacgtcgccgaggagacgggcgtgaccgcgggggag
atccggtcggtcgcacccgacgaggcccgcgacgagaccgacttcgtctccgcgacgctg
cgcgcgctggtcgccgatctggagggacaggtcgccgaccgcgaggcggcggtcgcggcc
gacctccgggagacgctcgacgacgccggcgaggggatcgaggccgcggtcgacgcggtg
gacgagctcgccttcgacctctcgctcgcgcgcttcgccgcgaaacacgacctcacgcgg
cctgagctggtcgaggacgggctggcggtccgtggcgcgcggaacctctttctcgacggt
gacgtccagccagtcacctacggcgtcgggacgcactcggtcgcgggtgacgacgccgac
ccgccctccggcgaccgcgtcgcggtgctgacgggcgcgaactccggcgggaagacgacg
ctgctggagacgctgtgtggtgtcgcgctgctggcgtcgatggggctgccagttccggcc
gaggacgcggaagtcgggcggttcgacacggtcgtgttccaccgccggcacgcctcgttc
aacgccggcgtgctggagtcgacgctgcgctcggtcgtgccgccgctgaccggcgagggg
cgggcgctgatgctcgtcgacgagttcgaggcgatcaccgaacccggccgcgcggcggac
ctgctgaacggactggtcgacctgaccgtcgaccgcggcgcgctgggcgtgttcgtcacc
cacctcgcggaggacctctcgccgctgcccggcgccgcccgcgtcgacgggatcttcgcg
gaggggctgaccgacgaactcgaccttcgggtcgactaccaaccacggttcggcactgtc
gggcgctcgacgccggagttcatcgtctcgcggctggtcgcgaacgccggcgaccgcgac
gagcgcgcggcgttccgctcgatcgcggccgcggtgggggaggaggcggtccagcggacg
ctctcggacgcggagtggtcgccgtag

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