Halolamina sp. CBA1230: B4589_003615
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Entry
B4589_003615 CDS
T06651
Name
(GenBank) GAF domain-containing protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
haln
Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haln03000
]
B4589_003615
Transcription factors [BR:
haln03000
]
Prokaryotic type
Helix-turn-helix
Other families
B4589_003615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAT
GAF_2
HTH_10
Response_reg
GAF
GAF_3
HTH_20
Sigma70_r4
HTH_5
HTH_1
GerE
DUF134
HTH_24
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QKY19506
LinkDB
All DBs
Position
complement(715856..718024)
Genome browser
AA seq
722 aa
AA seq
DB search
MSSEALELLLIEDNPGDARLIEEMLRDAETLLERVDLGASSGLRIHNETTLEDGADRLDE
SDVDVVLLDLGLPDSSGLETLTSIIDVAELVPVIVLTGLQDERVGIEAIKRGAQDYLVKN
EVSSDLLVRSIHHAVERNRQERERTHRHEQLEALNRLTRELMDAESPTAVSERVVTAAQE
RLGLPVMAVALYDDEAAALRTTGGTADADELLDLDALLSSDGGAGWRAFAEGGDPTTIDG
EAAPDPLSELALFPMARHGVLVVGETASGGISSADFDFVGTVAGNVEAALDRVERERERE
ERERLLEEQNRTLERLNRINDIIRSISRALVRASTRQEIETVVCEQLADAGPYGLAWIAE
HDHSTGDISVRELAGGEHDPVDEVDRGIAALAGTGSPVERAAEQREPQVVNDVLDDGEFD
GWQRAALDRGYHAMASIPLVYEDAMYGVLNVYADQTGVFGDLEQAVLDELADTIAYAINA
AESKKALVGQEVIRLEFDVGDTEMPFVELARDLDCSLVAENFVFRSDGGVRRFLSVRGAT
ADGVSGAAERLPLGEFGLVSEYEADGDPVCLFRMGLTADSPERTMVEHGARPHELRAGDD
EAVVVAELGSDAAVREFVELFRDRHPGASLVAQRTHHRSESSAAQQRASAAEALTDRQIE
AIRTAYFSGFFDRPRKHTGTEIADAMGISQPTFSHHLREAQRKLCTVLFEQDADPPIDGA
DD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagcgaggcgttagagctactcctgatcgaggacaaccccggcgacgcgcggctg
atcgaggagatgctccgcgacgccgagacgctgctcgaacgcgtcgacctcggggcgtcg
tccggcttgcggatccacaacgagaccacgctggaggacggcgccgaccgcctcgacgag
agcgacgtcgacgtggtgctgctcgacctggggctccccgacagcagcgggctggagacg
ctcacgtcgatcatcgacgtcgccgagctggttccggtgatcgtgctcaccgggctccag
gacgagcgcgtggggatcgaggcgatcaaacggggcgcccaggactacctcgtgaaaaac
gaggtgagtagcgacctgctcgtgcgctcgatccaccacgccgtcgagcggaaccgccag
gagcgtgaacgcacccaccgccacgagcaactggaggcgctcaacaggctgacgcgggag
ctgatggacgccgagtcgcccacggccgtcagcgagcgcgtcgtgaccgccgcccaggag
cggctcggcctgcccgtgatggcggtcgcgctgtacgacgacgaggcggccgcgctccgc
accaccggggggacggccgacgccgacgagctgctggatctggacgcgctgctctccagc
gacggcggcgcgggctggcgcgcgttcgccgagggcggcgaccccacgacgatcgacggc
gaggcggctcccgacccgctctccgagctggcgctgttcccgatggccagacacggcgtg
ctcgtcgtcggggagacggcgtccggggggatcagctcggccgacttcgacttcgtcggg
acggtcgcgggcaacgtcgaggccgcgctcgaccgcgtcgagcgcgaacgcgaacgcgag
gagcgcgagcgcctgctcgaggagcagaaccgcacgctcgaacgactcaaccggatcaac
gacatcatccgcagcatctcgcgggcgctcgtgcgggcgtcgacccggcaggagatcgag
acggtcgtctgcgagcagttggccgacgccggcccctacgggctggcgtggatcgccgaa
cacgaccactcgaccggcgatatctccgtccgcgagctggcgggcggggagcacgacccc
gtcgacgaagtcgaccgcgggatcgcggcgctcgcggggacgggatcaccggtcgagcgc
gccgcggagcaacgggagccacaggtcgtcaacgacgtgctcgacgacggcgagttcgat
ggctggcagcgcgcggcgctggaccgggggtaccacgcgatggcgtcgatcccgctcgtg
tacgaggacgcgatgtacggcgttctcaacgtctatgccgaccagaccggcgtgttcggc
gacctggagcaggcagtgctggacgagctcgcggacacgatcgcctacgccatcaacgcc
gccgagagcaagaaggcgctcgtgggtcaggaggtgatccggctcgagttcgacgtgggc
gacaccgagatgccgttcgtcgagctcgcccgcgatctggactgctcgctggtcgccgag
aacttcgtgttccgctccgacggcggcgtgcgtcggttcctctccgtccgcggcgccacc
gccgacggggtgtccggggccgccgaacggctccccctcggggagttcgggctggtctcg
gagtacgaggccgacggcgatccggtctgtctgttccggatgggactgacggcggacagc
cccgagcgaaccatggtcgagcacggcgcccggccccacgagctccgtgccggcgacgac
gaggcggtggtggtagcggagctgggaagcgacgccgccgtccgggagttcgtcgaactg
ttccgggatcgccaccccggcgcgtcgctggtcgcacagcgcacccaccaccggtccgag
tcgtcggccgcccagcagcgggcgtccgcggctgaggcgctgacggaccgccagatcgag
gcgatacggacggcgtacttcagcggcttcttcgaccgaccgcgcaaacacaccggcacc
gagatcgccgacgcgatggggatctcccagccgacgttcagccaccacctccgggaggca
cagcgcaaactctgtacggtgctgttcgaacaggacgccgaccctcccatcgacggggcc
gacgactga
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