Halolamina sp. CBA1230: B4589_004645
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Entry
B4589_004645 CDS
T06651
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
haln
Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_004645
Enzymes [BR:
haln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B4589_004645
DNA repair and recombination proteins [BR:
haln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B4589_004645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DUF2800
CCDC24
NERD
Motif
Other DBs
NCBI-ProteinID:
QKY19701
UniProt:
A0A7D4Y396
LinkDB
All DBs
Position
complement(923203..927063)
Genome browser
AA seq
1286 aa
AA seq
DB search
MTDQMDTASNDDITLTRAQQRAARTIDRNVSVEAGAGTGKTTMLTERYLTILRAHLDGPD
SLTAADDEPGYCLPDDIDRITDPEAARRLPERIVVTTFTDRAAEDLARSIREKIHDRLDD
IDDPDRWAVWRAAADGVEAGYIDTTHGFCSRILEEYAVTHPAVDPDFEVLEDTDAARLRT
TVATELVESEPPGVRVLAPQFDRSKLVDVLAELIAESDMTSEWIDEIRDLESQEAYEAHL
VELHPLDADPAHLLETVRDDLDTLCELYSDDDVADRLGTNPTKRVGNDVLAFVEATSRQD
IADATPIEQLELFRSLCDTLTNSDGDRYGDGTYYGNKSFRQSDGPTATRFRDAMDSVLDT
LAPATRPTDASLDPDRDAHELLTALADLAEAALTEYNDRKHQRGVLDYNDLIGHTLTFLT
DPDQDAVADLREDLLYIMVDEFQDTNTRQWQLVQALTSGTDPFTADNVCVVGDVKQSIYR
FRDADVTIFDDATTAMHDANTANGTNPRNPELTTNFRTLPETLQAINGLFDHVFAYGNDE
PYEAVSGPLTAGRDTPTDLSPITEYLPVPVETDLRDRYLDTDHGLTDLPESEPADIEATA
LANRIAALLTDNTLVTDDDPESDTDTRPVQPEDIAVLIRSRSDLKDYERGLRAADIPYTV
IKGEGFFDTPEIRPFIALLNALADPTDDIALYAAARSPLCGLTDTQLATAHDTDDTLWNS
LQTSTDPAVESVVEDIERWREYAGTGNTPGATVESWVALADRILEETGYLAAIAADERGT
TALANIDKLRDKLREFDANGVPSIDRVTTRLADQAEQGRKEPEANDATDSTGVRIMTVHE
AKGQEFPVVAMPGLGKGFNDRARISNGSIEYERVPIAGERRPLLGLNVSTDDRTDTDATL
MRRVARDRRRAEEHAEEKRILYVAATRAEDHLILTGRHNADGDHDTGIEQPDPDDPSSPI
DWIQPALFNTDTDTAGWWDTLEANGSFTVTLPYEIDGDTGRGTLDVRLPPDDAQYDPDPD
PVPATTERSPYTYEQPWEFTLSASDLTRIPAGTVELHEHDDTNQVTASPVTNESSEEHEH
DYPDTDTRNIPAAIYGHAVHRLCETRPPRDERRRVIEQAIQEQHDRTPGLTESTYPDSAF
DAIETAADAAIQYLNTLHSTLNVQQIHDEYYIELTLGNGTVSGFIDHLVVTPDTYHVIDY
KTDRKASTQTTEEFLTDRATHHQPQLQAYAAALNQQDPTRDVTATLYFTDVEDTYTWEAP
EFTHALEDTVQLLQEQLDQTSVRVGR
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccaaatggacacagcctcgaacgacgacatcacgctcacccgcgcccagcaa
cgcgccgcccggacgattgaccggaacgtctccgtcgaagctggagccggaaccgggaag
acgacgatgctcaccgagcggtaccttacgatcctccgcgcgcatctcgacggtccggac
agcctcaccgcggctgacgacgaaccgggctactgcttaccggacgatatcgaccggatt
accgaccctgaagccgcccggcgactcccggagcgtatcgtcgtcaccacgttcaccgac
cgggcggccgaagacctcgcacgatcgatccgcgagaagatccatgaccgactcgacgat
attgacgaccccgaccggtgggccgtttggcgcgccgccgccgacggcgtcgaagccggg
tacatcgacaccacgcacgggttctgcagccgtatcctcgaagagtacgccgtcacgcac
ccagcggtagacccggacttcgaagtactggaagacaccgacgccgcacgactccgaacc
accgtcgctaccgaactcgtcgagtccgaaccgcccggcgtgcgcgtcctcgccccgcag
tttgaccggtcgaagctcgttgacgtgctggccgaactgatcgccgagtccgacatgacc
agcgagtggatcgacgagatacgcgacctcgaaagtcaagaagcgtacgaagcacacctt
gtcgaactgcacccactggacgccgaccccgcacacttgctggaaacggtacgtgatgac
ctcgacacgttgtgtgaactgtacagcgatgacgatgtcgctgaccgtctcggaacgaat
ccgacgaaacgcgtcgggaacgacgtacttgctttcgtcgaagcaacatctaggcaggac
atcgcggacgcaacgccgatcgagcaactcgaactgttccgcagcctctgtgacacgctg
acgaacagcgacggcgaccggtacggggacggcacctactacgggaacaaatctttcaga
cagagcgatggcccgacagccacgcggttccgcgacgcaatggatagcgttcttgatacg
ctcgcacctgcgacgcgaccaacggacgcctcactcgatccggaccgcgatgcccatgaa
ctcctcactgcgcttgccgatctcgccgaagcggcgctcaccgagtacaacgaccggaag
caccagcgcggcgtccttgactacaacgacctgatcggccacacgcttacgttcctcacc
gaccccgaccaagatgctgttgccgacctccgcgaggacctgttgtacatcatggttgac
gagttccaagacacgaacacgcgccagtggcaactcgtccaagcgctcacgagcggtact
gacccgttcaccgctgacaacgtgtgcgtcgtcggcgacgtcaaacaaagcatctaccgc
ttccgcgacgccgacgtcaccatcttcgacgacgccacgaccgcgatgcacgacgcgaac
accgcaaacggaacgaatccccgtaacccggaactgactacgaacttccgcacacttccg
gagacgctgcaagccatcaacgggctcttcgaccacgtattcgcgtacggtaacgacgaa
ccgtacgaagccgtcagcggcccgctcaccgccgggcgcgacacgcctaccgacctttct
ccgatcaccgaatacctccctgtccccgtcgaaaccgacctccgcgaccgctacctcgac
acagaccacggcctcaccgatctccccgagtccgaacccgccgacatcgaggcaaccgcc
ctcgccaaccgcatcgccgctctcctcaccgacaacaccctcgtcaccgacgacgaccca
gaatcagacaccgatacccggcccgtccaacccgaggatatcgccgtgctcatccgttct
cgaagcgacctcaaagactacgaacgcggtcttcgcgcagcggacatcccgtacaccgtc
atcaaaggcgaagggttcttcgacacgccagaaatccggccgttcatcgcgctgttgaac
gcactcgctgaccccaccgacgacatcgcactgtacgccgccgcacgctccccgctgtgc
ggcctaaccgacacgcagctcgccaccgcccacgacaccgacgatacgctatggaactcc
ctgcagaccagtactgatcctgctgtcgaatccgtcgtcgaggacatcgaacgctggcgc
gagtacgccggcaccgggaacacacccggcgcaaccgtcgagagctgggtcgcactcgct
gaccggatcctcgaagaaaccgggtacctcgccgcgatcgccgccgacgaacgcggcact
actgctctcgccaacatcgacaagctccgagacaaactccgcgaattcgacgccaacggc
gtccccagcatcgaccgcgtcaccacacgactcgccgatcaagccgaacaaggccggaaa
gaacccgaagcaaacgacgcaaccgattcgaccggggttcgcatcatgaccgttcacgaa
gcgaaaggccaggaattccctgtcgtcgccatgcctgggctcgggaaggggttcaacgat
agggcacgtatcagcaacggcagtatcgagtacgaacgcgtcccgatcgccggcgagcgc
cgcccacttctcggtctcaacgtctctacggacgaccgtaccgacactgacgcgaccctc
atgcgacgcgtcgcccgtgaccgtcgccgcgccgaagaacacgccgaagagaaacgtatc
ctctacgtcgctgccacccgcgccgaagaccacctcatcctgaccggtcggcacaacgct
gacggcgatcacgacaccgggatcgaacaacctgaccctgacgacccgtccagccccatt
gactggatccaacccgcgctgttcaacacagatactgatacagctggctggtgggatact
ctcgaagcaaacgggtcattcaccgtgacactcccgtatgagatcgacggcgacaccggc
cgaggcactctcgacgttcgcctcccaccagacgatgcacaatacgaccctgatcctgat
ccagtcccggcaacgacggaacgttcaccgtacacgtacgagcagccatgggagttcact
ctctccgcatcagatctcacccgcatccccgccggcacggttgaactccacgaacacgac
gatacgaaccaagtcacggcgagcccggtgacgaacgaatcgagcgaggaacacgagcac
gactaccccgacacagacacgcgaaacatccccgcagccatctacggccacgctgtccac
cgactctgcgaaacccgcccaccacgtgacgagcgccgccgcgtcatcgaacaagcgatc
caagaacaacacgaccgcacaccgggactcactgaatcaacctaccccgactcagcattc
gacgccatcgaaacagccgctgacgccgcgattcagtacctcaacacactccacagcacg
ctcaacgttcagcaaatccacgacgaatactacatcgaactcaccctcggcaacggtact
gtcagtgggttcatcgaccacctcgtcgttactccagacacgtaccacgtcatcgactac
aagactgatcggaaagcgtcaacccagactaccgaggagttcctcaccgaccgagccacc
caccatcagccacaactgcaagcatacgctgccgcgctcaatcaacaagatcccacgaga
gacgtgactgccacgctgtacttcaccgacgtggaagacacgtacacgtgggaagccccg
gaattcacacacgcactcgaagacacagttcaactcctgcaggaacaactggaccaaaca
tcggtacgggtgggacgataa
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