Halolamina sp. CBA1230: B4589_004650
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Entry
B4589_004650 CDS
T06651
Name
(GenBank) PD-(D/E)XK nuclease family protein
Organism
haln
Halolamina sp. CBA1230
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Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
DUF3347
Motif
Other DBs
NCBI-ProteinID:
QKY19702
UniProt:
A0A7D5C2C4
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Position
complement(927060..930317)
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AA seq
1085 aa
AA seq
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MTTRRVFSEPTPSDGRAAILQWADERSSGVPQSVLYLEPPSVNDGIVADQWDTYGSPIEL
RCERFRTLVDELYEADTYDGSATHISSAERQWIVEEALSRLTDTEHPLYSEEDPSVGLIQ
QSEELLTLLEFAGTITAEEVEQRLTQEGLPRLAQSLSRFVALVHQVRADGFDDAKTFRSE
RFRHVLDAGQPLVESELSTIEVVIVGSFQTLSPQERDIIGLIADAFDTGIVLTRVTDADE
LSGADDAIRRISRWYDELGFTPHETDGTSSRSPRERAAASLYEHEDGQAEPVQVGSDVTL
ETHATIQDEIRDVARTVRSLIGSGVDPSSITVAPFDEGTYGNRITDALRAADVPVVASSS
RSLFATTTGKLFESVINLGTEPDRQGPLTRLLSNPLVAPNHRETVRNALQNADRLESTRV
STLAEYVDADTEAFIRDVVTACEEFVNATDIDSEREALLAELGVPTTENGAGLTDAIGFS
RHVRAREQQAIERAAEVCSSLTERRDAADRDDADTDVEELRRALEQVTVETSVGRESDSV
RVCSPAEAATNPAEYVFVPGLTTEHTPSPPRRLAFARPLNDSHPEFAASNPVAGTRYTFA
QLIAADADLTLTAPQHNRNGDPYILADPVVELERVTGLEASSVNDRAPPASYTDVHRELA
AAIDSNALTPDALSRNTDTYDINISGANASKRLSDGVSVAAERAADNVGDYDGHVDSGIV
TALRGEDQPYSPSQLETYADCGFKYYLKYVLDIEPDDEITLELNALDAGTYVHDVLERFY
RTWRGEGHDGVTEETVDEAEEVLYEVAASRLDELDARDTAFHDTWVTALFDGLTVPENRY
GNADGPPGLFKRFLHSEAELAPRDATPSYFEAHVGLTPDEPGPEVLADDPVRVPGTDVQI
RGKIDRLDITSDGGIVGMDYKTGSTASESDTIDGHTFQLPAYLLMAENALNGDPVGGSYY
QVDPTDSISPHAGTVGSEEDAAHAYWGADDPAPLRRYQTLEFDTRGEFTEFLHDVIPDRI
DRIAAAVDNGSFHPTVLSPDTAGCEYCPYRDACDVRHHRRHDIHDALTESNTPQYAPGID
TEDTQ
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacgccgggtgttctcggaacctactccctcagatggacgggccgccatactc
cagtgggccgacgaacgttcctcaggggtaccgcagtctgtgctgtatcttgaaccgcca
tccgtgaacgacgggattgtcgctgaccagtgggacacctacggctccccaattgagctt
cgatgcgaacgattccgtacgttagtagacgagttatacgaggcagacacctacgacggg
tcagcgacgcacatttccagtgccgaacggcagtggatcgtcgaggaagcactttctcgc
cttaccgatactgaacaccccctgtacagcgaagaggatccatctgtcggcctcatccag
cagtctgaagaactcctcacgctcctggagttcgccggtacgatcactgcggaggaagtc
gaacaacgattgacccaagaagggctccctaggctcgcgcaatcattatcccgattcgtt
gcgctcgttcatcaagttcgtgcggacggctttgatgatgcgaagacgtttcggagcgaa
cggttccgccatgtgcttgacgcagggcagccactcgtcgaatccgagctctcaacgatc
gaagtagtgatcgttgggtcattccagaccctctcaccacaggagcgcgacattatcggg
ttgatcgccgatgcgttcgacaccggaatcgtactgacccgcgtaactgacgccgacgaa
ctcagcggggctgatgacgcgatccgtcgaatcagccgatggtacgacgaactcggattc
acgccacacgagactgacggcacaagttcacgatcgccgcgtgaacgcgcagcggcatca
ttgtacgaacacgaagacgggcaagctgagccggttcaggtcgggtccgacgtgactctg
gagacccacgcgacgatacaagacgaaattcgtgacgttgctcggacagtccgatcgtta
atcgggtccggtgtcgatccgagttcgatcaccgtcgcaccgttcgatgagggcacatac
gggaatcgaatcacagacgcgcttcgagctgcggacgtgccggtagtggccagttcgtca
cggtcgctgttcgcaacaacgaccggcaaactgtttgagtccgtaatcaaccttgggacc
gaaccagaccggcaaggcccgctcacacgactcctgtcgaacccactcgtcgcccccaac
caccgtgaaaccgttcggaacgcactccagaacgctgaccggttggagtccacgcgcgtc
tctaccctcgccgagtacgtcgatgcggacactgaggcgttcatccgtgacgtcgtgacc
gcctgcgaagagttcgtaaatgcgaccgatatcgacagtgaacgggaggcgttgcttgcg
gaactcggcgtcccgacgaccgagaacggggcaggcctcaccgacgccatcgggttctca
cggcacgtccgcgcacgggaacaacaggccatcgagagggcagccgaagtatgttcgtcg
ctgacggaacgtcgggacgcagcggatcgagacgacgcggacacagatgtagaggagttg
cggcgtgcgctcgaacaggtgacggtcgaaacatcggtgggtcgggagtccgacagcgtt
cgagtgtgttcgccggcggaggcggccaccaaccctgccgagtacgtgttcgtccccggg
ctaacaaccgaacacaccccgtcaccaccacgccgcctcgcattcgcacggccacttaac
gactctcacccagagttcgcggcatcaaacccggttgccgggacccggtacacgttcgcg
cagctaatcgctgccgacgcggacctgacgcttaccgccccgcaacacaaccggaacggc
gacccatacatcctcgctgaccctgtcgtcgaactcgaacgtgtcactgggttagaagcc
agcagcgtgaacgaccgcgcacccccggcgtcgtacactgacgtgcaccgagaacttgcg
gcagcgattgactcgaacgcactcacgcctgacgcgctctcaaggaacaccgacacgtac
gacatcaacatctcaggagcgaacgcgtcgaaacgcctctcagacggcgtgtcggtcgcc
gccgaacgagcggccgacaacgtcggcgactacgacgggcacgtggattcagggatcgtc
acagccctgcgaggcgaagatcagccgtacagcccgagtcagctggaaacgtacgctgac
tgcgggttcaagtactacctcaaatacgttctcgacatcgaaccggacgatgagatcacg
ctggagttgaacgcgcttgatgccggcacgtacgtccacgacgttctcgaacgcttctac
cgcacgtggcgcggagaaggccacgacggcgtcacggaggagacggttgatgaggcagag
gaggtactgtacgaagtggcagcgtcccggcttgacgaactcgacgcacgagacactgcc
ttccacgacacgtgggttaccgcgctttttgatgggctcaccgttccggagaacaggtat
ggtaacgccgacggcccacccggactgttcaaacgattcctgcactccgaggccgaactt
gcaccgcgggacgcgacgccgtcgtacttcgaagcgcacgttggcctcactcctgacgag
cccggccccgaggtcctcgcggacgacccggtgcgcgtccctggaacggacgtgcagatc
cgcgggaaaatcgaccggctcgacattaccagtgacggcggaatcgtgggcatggactac
aagacaggcagcacggcaagcgagagcgacacgatcgacgggcacaccttccagttgccc
gcgtacctgttgatggccgagaacgcactcaacggggaccccgtcggaggctcctactac
caagtggatccgaccgactcaatctcaccacatgcgggcacggtcggcagtgaagaggac
gccgctcacgcgtattggggtgcagacgacccagcgccacttcgccgctaccagacgttg
gagttcgacacgcgcggcgagttcactgagttcctccacgacgtcattccggaccgtatt
gaccggatcgcggctgccgtggacaacgggtcgttccacccgacggttctcagcccagac
acggctggctgtgagtactgcccgtaccgcgatgcgtgcgacgttcgacaccaccgacgg
cacgacatccacgacgcgctcacagaatcgaacacgccacagtacgcacccggcatcgac
acggaggacacccaatga
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