Halolamina sp. CBA1230: B4589_005025
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Entry
B4589_005025 CDS
T06651
Name
(GenBank) mRNA surveillance protein pelota
KO
K06965
protein pelota
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
B4589_005025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haln03019
]
B4589_005025
Messenger RNA biogenesis [BR:
haln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
B4589_005025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
NMD3_OB
Motif
Other DBs
NCBI-ProteinID:
QKY19773
UniProt:
A0A7D4Y4C8
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All DBs
Position
987404..988474
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AA seq
356 aa
AA seq
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MRIVQRGHGAEGRDRVTLVPETVDDLWHLSHVLEPGDLVEGDTTRRIQRNDDQMRDTGGE
REHLHVTLEVEDVEFARFANRLRVGGVIQHCSMEDQIGLHHTINVETHEELTIEKYLKPD
QRDRIEEAAEATDAPDVAVVTVEEGEAYVHTVQQYGTDEYVSLTAPTGKGEYAQPRNRLF
EELGSALQHVDAEAIIVAGPGFTKRDALDYLKEEYPEVAEKVATTVDTASAGDRGVHEVL
KRGAVEDVQDQTRIARESELIDELTERISTGEKATYGVEETAEAAEFGAVETLLVVDERL
RTERQDGGDWDRDANEIIETVEQKGGEVVVFSSEFQPGEQLSNLGGIAALLRYRIQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcgtccagcgcggtcacggcgcggagggccgtgaccgggtgaccctcgtcccc
gagactgtcgacgacctctggcatctctcacacgtcctcgaaccgggcgacctggtcgag
ggcgacaccactcgccggatccagcgcaacgacgaccagatgcgcgacaccggcggcgag
cgcgaacacctccacgtcaccctcgaagtcgaggacgtggagttcgcccgcttcgccaac
cgcctccgggtgggtggcgtgatccagcactgctcgatggaggaccagatcggcctccac
cacacgatcaacgtcgagacccacgaggagctcacgatcgagaagtacctcaagccggac
cagcgcgaccggatcgaggaggccgcggaggccaccgacgccccggacgtcgcggtcgtc
accgtcgaggagggcgaggcgtacgtccacacggtccagcagtacggcaccgacgagtac
gtctcgctcacggccccgacggggaagggggagtacgcccagccgcggaaccgcctgttc
gaggaactcgggtcggcgctccagcacgtcgacgccgaggcgatcatcgtcgccggcccg
gggttcacgaagcgcgacgcgctcgactacctgaaagaggagtaccccgaggtggccgag
aaggtcgcgacgacggtcgacaccgcctcggcgggcgatcgcggcgtccacgaggtgctc
aaacgcggcgcggtcgaggacgtgcaggaccagacacggatcgcccgcgagagcgaactg
atcgacgagctcaccgagcgcatctcgaccggcgagaaggcgacctacggcgtcgaggag
accgccgaggccgcggagttcggcgcggtggagacgctgctggtcgtcgacgagcgactg
cggaccgagcgccaggacgggggcgactgggaccgggacgcaaacgagatcatcgagacc
gtcgagcagaaaggcggggaggtggtggtgttctcctcggagttccagcccggcgagcag
ctgtcgaacctgggcgggatcgcggcgctgctgcggtaccggattcagtga
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