Halolamina sp. CBA1230: B4589_006285
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Entry
B4589_006285 CDS
T06651
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
haln
Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haln03009
]
B4589_006285
Ribosome biogenesis [BR:
haln03009
]
Prokaryotic type
ribosomal protein modification factors
B4589_006285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QKY20003
UniProt:
A0A7D5BY32
LinkDB
All DBs
Position
1229233..1230948
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AA seq
571 aa
AA seq
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MDIGIVGSGPAVDAIEAAMDDLDVRVVAAGSDEFADVGLCFVVGAAGAEAFGTAADTGAL
DRWVAVEIGGIGGHAVDEVDAAVSAFTPDSGCYRCLQRRVAATTEASEDDPSAPTSAVRY
AGAVAGRRATRILTGEDLGGTVVEVADADVQRRFQPVPYCGCAGGRDRTLSLDYRETDLD
SAVGRAEIAVDDRVGLIEQVGEQASFPLPYYLASIAGTEGFSDASAAPFAAGAAVDWNEA
YMKALGEGLERYAAGVYRNAEFRRATATALDGAVFPTRFVTSDGYDPGPEAERPWVPGLE
LTSEDGVWLPAEVVQYPPPERRIKPPITTGLGLGSSTVEATISGLSEVIERDAAMLAWYS
DYEPLGLSVDDEEFRELEKRARAEELWVSVTLLTQDIDVPAVAATVHRDDGEWPRFAAGS
GAALDPVDAATGAFAEALQNWTELRDMGPEQASEEGGAIGEYAEFPDRVRELTHPETTVP
ADSVADEAAEFSGEAALDALVERVADAGLTPYAARTTTRDVAALGFEGVRAVIPEAQPLF
TAEPFFGDRLERVAASMGFEAKPGRAYHPFP
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggaatcgtcgggagcggccccgccgtcgacgcgatcgaggcggcgatggac
gacctcgacgtacgcgtggtcgcggccgggagcgacgagttcgccgacgtcgggctctgt
ttcgtcgtcggcgccgccggcgcggaggcgttcgggaccgccgccgacaccggcgcgctg
gatcgctgggtcgccgtcgagatcggcggcatcggcgggcacgccgtcgacgaggtggac
gccgccgtctcggcgttcacgcccgactcgggctgctaccgctgtctgcaacgccgcgtc
gccgcgacgaccgaggcgagcgaggacgacccgtccgcacccacgagcgccgtgcgctac
gcgggcgcggtcgcgggccgccgggcgacgaggatcctgaccggcgaggatctcggcggt
acggtcgttgaggtcgctgacgcggacgtccagcgccggttccagccggtgccgtactgt
ggctgtgccggcgggcgtgatcgaacgctttcgctcgactaccgtgagaccgacctcgac
agcgccgtcgggcgggccgagatcgcggtcgacgaccgcgtcggcctcatcgagcaggtg
ggcgaacaggcgtcgttcccgctgccgtactacctcgcgtcgatcgcggggaccgaaggg
ttctccgacgcgagcgccgcccccttcgcggcgggcgccgctgtcgactggaacgaggcg
tacatgaaggcgctcggcgaggggctggagcgctacgcagccggcgtctaccggaacgcg
gagttccgccgcgcgaccgcgacggcgctcgacggcgccgtgttcccgacgcggttcgtc
acgagcgacggctacgacccgggccccgaggccgagcgcccgtgggtaccgggactggag
ctcacgagcgaggacggcgtctggctccccgccgaggtcgtccagtaccccccgcccgag
cggcggatcaagccgccgatcaccaccgggctcggtctcgggagttcgaccgtcgaggcg
acgatctccgggctctcggaggtgatcgaacgcgacgccgcgatgctcgcgtggtactcc
gactacgagccgctggggctgtcggtcgacgacgaggagttccgcgaactcgagaagcgc
gcccgcgccgaggaactctgggtgtcggtcacgctgctcacgcaggatatcgacgtgccg
gccgtcgccgcgacggtccaccgcgacgacggtgagtggccccgcttcgctgccggctcc
ggggccgcgctggatcccgtcgacgccgcgacgggcgcgttcgcggaggcgctccagaac
tggaccgaactccgggatatgggcccggaacaggcgagcgaggagggtggcgccatcggc
gagtacgccgagttcccggaccgtgtccgggagctcacccaccccgagacgactgtgccg
gccgactcggtcgcggacgaggctgcggagttctctggcgaggcagcgctcgacgcactc
gtggagcgcgtcgccgacgccggcctcacgccctacgccgcccgaacgacgacccgggac
gtggctgcgctggggttcgaaggcgtccgcgccgtgatcccggaggcacagccgctgttc
acagccgagccgttcttcggtgatcggctggaacgcgtggcggcgtcgatggggttcgag
gcgaagccggggcgggcgtaccacccgttcccgtaa
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