Halolamina sp. CBA1230: B4589_007920
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Entry
B4589_007920 CDS
T06651
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
haln
Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haln03036
]
B4589_007920 (smc)
Chromosome and associated proteins [BR:
haln03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
B4589_007920 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
CCDC39
AAA_23
AAA_21
DUF1664
Rod_CreS
EzrA
APG6_N
CCDC113_CCDC96_CC
CENP-F_leu_zip
FKBP15
Fez1
AAA_29
MscS_porin
DUF724
Laminin_II
Exonuc_VII_L
AAA_15
ATG16
AAA_13
Baculo_PEP_C
DUF745
LIP-1
GAS
Laminin_I
ABC_tran_CTD
OVT1
HH_AprE
ERM_helical
FliJ
Mod_r
Fib_alpha
DUF4407
SlyX
HAUS1
Filament
Motif
Other DBs
NCBI-ProteinID:
QKY20308
LinkDB
All DBs
Position
complement(1521344..1524931)
Genome browser
AA seq
1195 aa
AA seq
DB search
MHIQELVLDDFKSFGRETHIPFYEDFTVITGPNGSGKSNIIDGVLFALGLARTRGIRAEK
LPDLIYNPGGEGSETDGPREASVTVVLDNSDDTLSRSQVTTAAGSENIGDVETITVKRRV
KETEDNYYSYYYLNGRSTNLSDIQDLLAQAGITPEGYNVVMQGDVTEIINMTAYQRRGII
DEIAGVAEFDEKKASAREELEVVEDRINKADLRIEEKEERLEQLADERETALEYQELRDE
REEYEGYLRAAELEDKREDLEGTEAKIDNAEAKLAEKQAALDEAEGKLTRLEAELDELDS
EIERTGEDEQLRVKSEIEEVKGEIARLEDRIEASEERIEEAEAERRGAFVDIDRKEEEIE
ELEEEIRDLKVEKANVKSDVVSKENELQEVEEEIENVDTAFDELKAELEREKEAAESLRE
QKNEKQREKDRLLDEARRRSNRVSDREDELQEVQESLPDLRARVSNLHSELDKAKKNEST
AESIVEELKGRKQELKGDISEIDEELRELRNEYAELEAKADDNGDSSWPRSVTTIKNAGM
SGVHGPVGELASVPREYAEACETAAGGRLANVVVDDDGVGSDCIDYLKSRNAGRATFLPM
TEMDDRSLPREPNDPGVVGFARELVDYDDRYSGIFSYVLGSTLVVEDMETARHFMGDYRM
VTLDGDLVEKSGAMTGGSGGGSRYSFSKSGGGRLERLAEQIHEYEEERQSIQDDLDEVED
DLTDARERKSAAAEKVREIEADVEDAEEDVEEAEQRVEDLEDELAELREEREEVDAEMTE
LDEEIADLDERIAAAEDSIEEIEAEMADSKIPELSARAEEIREEIAELEDRSDDLDAELD
DRRREKEYAENSLEELHDTVEEAQNRKAELEDDIEEFEAEIEEKEDVLEEKHEKVAELEE
QLADLKEEREALKEDVREARSERNDRQDEVDRVENRLDSLKRSAVALSEEISELESQVGE
YDADEIPPHDEVEAEIERLSEAMEELEPVNMLAIDEYDEVESDLDQLTEQREVLVEERDG
IEERIEGFEQRKKQTFMDAFEAIDEQFQRIFSRLSDGSGELVLEDPENPFEEGLTMKAQP
ADKPVQRLDAMSGGEKSLTALAFIFAIQRHNPAPFYALDEIDAFLDAVNAERVGEMVDDL
AGDAQFVVVSHRSALLDRSERAIGVTMQENNISAVTGIDLADGERPETEVATDDD
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcacattcaggaactcgttctggacgacttcaagagcttcgggcgcgagacgcatatc
ccgttctacgaggacttcaccgtcatcaccgggcccaacggctcggggaagtccaacatc
atcgacggggtgctgttcgcgctggggctcgctcgtacgcgggggatccgcgccgagaag
ctgcccgacctgatctacaaccctggcggcgaggggagcgagaccgacgggccgcgtgag
gcgtcggtgacggtcgtgctggacaactccgacgacacgctcagccgctcgcaggtgacg
accgccgcgggcagcgagaacatcggcgacgtggagacgatcacggtcaagcgccgggtg
aaggagaccgaggacaactactactcctactactacctcaacggccgctcgacgaacctc
tcggacatccaggacctgctcgcacaggccgggatcactccggaggggtacaacgtcgtg
atgcagggcgacgtgaccgagatcatcaacatgaccgcctaccagcgccgggggatcatc
gacgagatcgcgggcgtcgcggagttcgacgagaagaaagcctccgcccgtgaggaactg
gaggtcgtcgaggaccgcatcaacaaggccgacctccggatcgaggagaaggaggaacgg
ctggagcagttggccgacgagcgcgagactgccctcgagtaccaggagctgcgcgacgag
cgcgaggagtacgaagggtatctccgcgcggccgaactcgaggacaagcgtgaggacctt
gaagggaccgaggcgaagatcgacaacgcggaggcgaaactcgcggagaagcaggccgca
ctcgacgaggccgaggggaagctgactcggctggaggcggagctcgacgaactcgactcc
gagatcgagcgcaccggcgaggacgaacagctccgggtcaaaagcgagatcgaggaggtc
aaaggcgagatcgcccggttggaggatcgcatcgaggccagcgaggagcgcatcgaggag
gccgaagccgagcgccgcggcgcgttcgtcgacatcgaccggaaggaggaggagatcgag
gagctcgaagaggagatccgcgacctgaaagtcgagaaagccaacgtcaaaagtgacgtc
gtctcgaaggagaacgagctccaggaggtcgaagaggagatcgagaacgtcgacaccgcg
ttcgacgagctcaaagccgaactcgaacgcgagaaggaggccgccgagtcgctgcgggag
cagaaaaacgagaagcagcgcgagaaggaccgcctgctcgacgaggcccgccggcgctcc
aaccgcgtcagcgaccgcgaggacgaactgcaggaggttcaggagtcgctgcccgacctc
cgggcgcgcgtgtcgaacctccactcggagctggacaaagcgaagaaaaacgagtccacc
gccgagtcgatagtggaggagctcaaggggcgcaaacaggagctcaaaggcgacatctcc
gagatcgacgaggagctccgcgaactccgcaacgagtacgccgaactggaggccaaagcc
gacgacaacggcgacagttcgtggccccgctcggtgacgacgatcaagaacgccggaatg
agcggcgtccacggccccgtgggcgaactcgcctcggttccacgcgagtacgcggaggcg
tgtgagaccgccgcgggcggccggctcgcgaacgtcgtcgtcgacgacgacggcgtcggc
tccgactgtatcgactacctgaaatcacggaacgcggggcgggcaacgttcctcccgatg
acggagatggacgaccgcagcctcccgcgggagcccaacgaccccggcgtcgtcggcttc
gcccgcgaactggtcgactacgacgaccggtactcggggatcttctcgtacgtcctcggc
tccacgctggtcgtcgaggacatggagaccgcccgccacttcatgggcgactaccggatg
gtgacgctcgacggcgacctcgtcgagaagtcgggcgcgatgaccggcggctccggcggc
ggctcccgctactcgttctcgaagtccggcggcggccggctggagcgactggccgagcag
atccacgagtacgaggaggagcgccagtcgatccaggacgacctcgacgaggtggaggac
gacctcacggacgcccgcgagcgcaagagcgccgcggccgagaaagtccgcgaaatcgag
gccgacgtcgaggacgccgaggaggacgtcgaggaggccgagcagcgcgtcgaggacctc
gaggacgagctggccgagctccgtgaggagcgcgaggaggtcgacgcggagatgaccgaa
ctcgacgaggagatcgcggatctcgacgagcgcatcgcggccgccgaggactccatcgag
gagatcgaggccgagatggccgactcgaagatcccggaactctccgcgcgggccgaggag
atccgcgaggagatcgcggagttggaggaccgcagcgacgacctcgacgccgaactcgac
gaccggcgccgcgagaaggagtacgccgagaactccctcgaggagctccacgacaccgtc
gaggaggcccagaaccgcaaggccgaactcgaggacgacatcgaggagttcgaggcggag
atcgaggagaaggaggacgttctcgaggagaaacacgagaaagtcgccgagctcgaggag
cagctcgccgacctcaaggaggaacgcgaggcgctcaaggaggacgtgcgcgaagcgcgc
agcgagcgcaacgaccggcaggacgaggtcgaccgcgtggagaaccggctcgactcgctg
aaacgcagcgcggtcgcgctgagcgaggagatctccgaactcgagagccaggtcggcgag
tacgacgccgacgagatcccgccccacgacgaggtcgaagccgagatcgagcgcctgagc
gaggcgatggaggagctggagccggtgaacatgctcgcgatcgacgagtacgacgaggtc
gagtcagatctcgaccaactcacggagcagcgcgaggtgctggtcgaggagcgcgacggg
atcgaggagcgcatcgaggggttcgaacagcggaagaaacagacgttcatggacgcgttc
gaggccatcgacgagcagttccagcgcatcttctcccggctctccgacgggagcggggaa
ctggtgctcgaggaccccgagaacccgttcgaggaggggttgacgatgaaagcccagccc
gcggacaagcccgtccagcgactggacgcgatgagcggcggggagaagtcactgacggcg
ctcgcgttcatcttcgcgatccagcgccacaaccccgcgccgttctacgcgctcgacgag
atcgacgcgttcctcgacgcggtcaacgccgagcgcgtcggcgagatggtcgacgacctc
gcgggcgacgcgcagttcgtcgtcgtcagccaccgttcggcgctgctcgatcgctcggag
cgcgctatcggcgtcacgatgcaggagaacaacatctccgccgtcacggggatcgacctc
gcggacggcgagcggccggagacggaggtggcgaccgatgacgattga
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