Halolamina sp. CBA1230: B4589_008375
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Entry
B4589_008375 CDS
T06651
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4589_008375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haln03021
]
B4589_008375
Transcription machinery [BR:
haln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
B4589_008375
Prokaryotic type
Archaeal type
TFB
B4589_008375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DUF8122
DZR
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QKY20393
LinkDB
All DBs
Position
complement(1603990..1604844)
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AA seq
284 aa
AA seq
DB search
MSTTRSTGCPECDGRLTADGDETVCASCGLIVSTDRLDRGPEWRSFEDDDRNPARCGAPL
TRSRHDRGLSTEIGRDGRGKNRKWSRLRRQHRRTQIRSKRERNQVYGFTEIRRLMGALEL
PDRIRDQSCSLFESAQNEDLLRGRSIEGFASAAVYAACRVAGVSRTTAEVLDAAKATADE
HRAAYDAMNRELGLPVSAAEPAEFVARFASELDLGQAVRRRARDLAEEAVESGHANGRNP
GGVAAGALYLAARRENETVTQAEAAAVADVTSVTVRTTYQALQD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacgcgctctacgggatgtccggaatgcgacgggagactgaccgccgacggc
gacgagacggtctgtgcgagctgcgggctgatcgtctcgacggaccggctcgaccgcggc
cccgaatggcggagcttcgaggacgacgaccgcaaccctgcgcggtgtggcgccccgctc
actcgctcccgccacgaccgggggctctcgacggagatcgggcgcgacggccgcgggaag
aaccgcaagtggtcccgcctgcgccgtcagcaccgccggacgcagatccgctcgaagcgc
gagcgcaatcaggtgtacgggttcaccgagatccgacggctgatgggggcgctcgaactc
cccgaccgcatccgcgaccagtcctgttcgctgttcgagtccgcacagaacgaggacctg
ctgcgcgggcgctcgatcgaggggttcgccagcgcggcggtgtacgccgcttgccgggtc
gcgggcgtctctcgcacgactgcggaggtgctcgacgcggcgaaagccaccgccgacgaa
caccgtgcggcctacgatgcgatgaaccgcgaactcggactgcccgtctcggcggccgag
cccgcggagttcgtcgcgcgcttcgccagcgaactcgacctcgggcaggcggtccgccgg
cgcgcccgcgacctcgcggaggaagcggtcgagtcgggtcacgccaacgggcgcaacccc
ggcggcgtcgcggcgggcgcgctctacctcgctgcccgacgcgagaacgagacggtcacg
caggccgaggccgccgccgtggccgacgtgacgtctgtcaccgttcggacgacgtatcag
gcgctacaggactga
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