Halolamina sp. CBA1230: B4589_008395
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Entry
B4589_008395 CDS
T06651
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B4589_008395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_008395
Enzymes [BR:
haln01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B4589_008395
DNA repair and recombination proteins [BR:
haln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B4589_008395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QKY20397
UniProt:
A0A7D4YQ22
LinkDB
All DBs
Position
complement(1606811..1607491)
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AA seq
226 aa
AA seq
DB search
MADDPAFPDPDSALVLEPGCERCPDLAACRNRIAWGNGPEDAEVLVVGEAPGAGIPDADC
SDAGRPSPASDKWRGGNWTGLAYTAQHSGRRIRETMAAVGYPDAFFTNAVKCFPADPDDP
STNREPTAAERENCRDHLRTEIDHVDPDAVVATGKHAAASMLAFEDRTVDGFVDSVLEPV
RLDSLDVMLVPILHPAYRDVWLSRLGYDREAYLDDLRTVLDAAVEG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaccccgcgttcccggacccggactcggcgctcgtgctcgaaccgggctgt
gaacgttgtcccgacctcgcggcctgccggaaccggatcgcgtgggggaacggccccgaa
gacgccgaggtgctcgtcgtcggcgaggcgcccggcgcgggcataccggacgccgactgc
tccgacgccggccgaccatcgccggcgtccgacaagtggcggggcgggaactggaccggc
ctcgcctacaccgcccagcactccgggcgacggattcgggagacgatggccgcggtgggc
tacccggacgcgttcttcacgaacgcggtgaagtgtttcccggccgatccggacgaccca
tcgaccaaccgtgaaccgacggctgcggagcgggagaactgccgagaccacctccggacg
gagatcgaccacgtcgaccccgacgccgtcgtcgccacgggtaaacacgccgcggcgtcg
atgctcgcgttcgaggaccggacggtcgacgggttcgtggacagcgtgctcgaaccggtc
cgtctcgactcgctggacgtgatgctcgtgccgatcctccaccccgcctaccgggacgtc
tggctctcgcggctcgggtacgaccgcgaggcgtacctcgacgatctgcgcacggtgctc
gacgcggcggtggagggctga
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