Halolamina sp. CBA1230: B4589_009215
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Entry
B4589_009215 CDS
T06651
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4589_009215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haln03021
]
B4589_009215
Transcription machinery [BR:
haln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
B4589_009215
Prokaryotic type
Archaeal type
TFB
B4589_009215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_6
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
QKY20547
LinkDB
All DBs
Position
complement(1751406..1752329)
Genome browser
AA seq
307 aa
AA seq
DB search
MPTSNIYDRGFDEDVQRGVTKPCPECGGEVRTNTAETVCEDCGLIINDQAIDHGPEWHVD
EEDEQRRTGAPLTAARHDRGLSTRIGSDQDAAGRDLAPEKRRRLARLRREHARGRWQSTQ
DRNLGHGLTEIRRIASALGLPDSVRDQACQLFRTAQTDGLLPGRSIEAMAAASVFAVCRC
NGHSRLIADVAPVAQVAQSRVENAYKVLNEALGLPTSPMAPPQFVPRLASDLGCTDAVQH
DAIRLAEQAVDAGVTTGVHPAGFAAACLYMAACAHDAPLTQADAAAAADVTMETVRNHRD
RLLSIVE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgagcaacatctacgatcgcgggttcgacgaggacgtccagcgtggtgtaacc
aagccgtgtcccgaatgcggtggggaggtgcggacgaacacggccgagaccgtctgcgag
gactgcgggttgatcatcaacgaccaagcgatcgatcacggcccggagtggcacgtcgac
gaggaggacgagcaacggcggactggcgcgccgctgaccgctgcccggcacgatcgcggc
ctctcgacacggatcggctcggaccaggacgcagccgggcgcgacctcgctcccgagaaa
cgccgccgcctcgcccgattgcgccgcgagcacgcccgcggccggtggcagtcgacacag
gaccgaaacctcggccacggcctcacggagatccggcggatcgcgagcgcgcttggtctc
cctgattccgtgcgtgatcaggcgtgtcagctgttccggacggcgcagaccgacggactg
ctaccagggcgctcgatcgaggcgatggcggcggcgagcgtgttcgcggtctgtcgctgt
aacgggcactcgcggctcatcgccgacgtggcgccggtcgcccaagtcgcgcagtcacgc
gtcgagaacgcctacaaggtactcaacgaggcactcgggttgcccacgtcgccgatggcg
ccgccgcagttcgtgccacggctggcgtcggacctcgggtgtaccgacgccgtgcagcac
gacgcgatacggctggctgagcaggccgtcgacgccggcgtcacgaccggtgtgcatccc
gcgggcttcgcggctgcctgcctgtacatggcggcctgtgcccacgacgcaccgttgacc
caagccgatgcggcagcggcggccgacgtgacgatggagaccgtccgaaaccatcgcgat
cggctgctctccatcgtagaatag
DBGET
integrated database retrieval system
