Halolamina sp. CBA1230: B4589_009455
Help
Entry
B4589_009455 CDS
T06651
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haln
Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haln03016
]
B4589_009455
Enzymes [BR:
haln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B4589_009455
Transfer RNA biogenesis [BR:
haln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B4589_009455
Prokaryotic type
B4589_009455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QKY20592
LinkDB
All DBs
Position
1801641..1802537
Genome browser
AA seq
298 aa
AA seq
DB search
MTDPLRDPPGERAVEELLSFGVVNLDKPAGPSAHQVAAWVRDLAGVDRAAHAGTLDPKVT
GCLPTMLGDATRLAPVFLEGGKEYIAVLELHGLPPTDVEATLAEFETEIYQKPPRKSAVA
RRLRSREIYELDLLELEDRQALLRIRCESGTYVRKLCHDLGLALGTGGHMGDLRRTATGP
FDDTDLRTLQDLADGLAWARKDDHEAFLRKVVSPAERAMAHLPAITIARSAAVAVADGAP
VYAPGVVDLDDDAAALDPGDDDLLACYTPDGSAVCLGKLVGDPDAESGEVVSLERVLA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacccactccgcgacccgccgggcgagcgtgccgtcgaggaactgctctcgttc
ggcgtcgtcaacctcgacaagccagccggcccctcggcccaccaggtggcggcgtgggtt
cgcgacctcgcgggcgtcgaccgcgcggcccacgcgggcacgctcgacccgaaggtgacg
ggctgtctgccgacgatgctcggcgacgcgacccggctcgctccggtgttcctcgaaggc
gggaaggagtacatcgccgtgctcgaactccacgggctcccgccgaccgacgtcgaggcc
acgctcgcggagttcgaaacggagatctaccagaagccgccccggaagagcgcggtcgcg
cgccgcctgcgctcccgggagatctacgaactcgacctgctggaactggaggaccggcag
gcgctgctccggatccggtgtgagagcggcacgtacgtccggaagctctgtcacgatctc
ggcctcgcgctgggcaccggcgggcatatgggcgacctgcggcgcaccgcgaccggcccg
ttcgacgacaccgacctccggacgctgcaggatctcgcggacggcctcgcgtgggcgcgc
aaagacgatcacgaggcgttcctccgcaaggtggtctcccccgccgagcgcgcgatggcg
catctgccggcgatcacgatcgcccgcagcgccgcggtggcagtggccgacggcgcgccc
gtctacgcgccgggggtcgtcgacctcgacgacgacgccgcagcgctcgatccgggcgac
gacgacctgctcgcgtgctacacgcccgacggcagcgcggtctgtctcgggaaactggtc
ggcgatcccgacgcggagtcgggcgaagtggtgtcgctggagcgcgtactggcctga
DBGET
integrated database retrieval system
