Halolamina sp. CBA1230: B4589_009705
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Entry
B4589_009705 CDS
T06651
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B4589_009705 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_009705 (uvrB)
DNA repair and recombination proteins [BR:
haln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B4589_009705 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B4589_009705 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_22
DUF87
AAA_30
DUF7934
DUF8048
TrwB_AAD_bind
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QKY20639
LinkDB
All DBs
Position
1839869..1841929
Genome browser
AA seq
686 aa
AA seq
DB search
MSDSESGPLSPDQPDAERPFRVDAPFEPAGDQPEAIEQLAAGFREGMDRQTLLGVTGSGK
TNTVSWLIEEIQQPTLVIAHNKTLAAQLYEEFRELFPDNAVEYFVSYYDYYQPEAYVEQS
DTFIEKDASINDEIDRLRHSATRSLLTREDVIVVASVSAIYGLGDPRNYVDMSLRLEQGQ
QIDRDELLGRLVDLNYERNDVDFTQGTFRVRGDTVEIFPMYGRYAVRVEFWGDEIDRIRK
VNTLEGEVVSEEPAVLLHPAEHYSIPEDRLQEAMAEIEELMEDRVRHFERQGDLVAAQRI
EERTTFDLEMLQETGYCSGIENYSVHLSDREQGEAPYTLLDYFPDEFLTVVDESHQTLPQ
IRGQFEGDKSRKDSLVENGFRLPTAYDNRPLTFEEFEAKTDETLYVSATPGEYEREESDQ
IVEQIVRPTHLVDPAVEVTSAQEQIDDLMDRIDERIENDERTLVTTLTKRMAEDLTEYLE
EAGVNVAYMHDETDTLERHEIIRSLRLGEIDVLVGINLLREGLDIPEVSLVAILDADQEG
FLRSETMLVQTMGRAARNVNGEVVLYADKRTDAMTSAIEETRRRRAIQQRYNEEHGFEPT
TIQKEIGETNLPGSKTDASGAANAEVGDADDAARQIEQLEDRMEEAADNLEFELAADIRD
RIRELREEFDLDGGDEGVAPEPDAEF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactccgagagcggtccgctctcgccggaccaacccgacgccgaacgaccgttc
cgcgtcgacgcccccttcgagcccgcgggcgaccagcccgaggcgatcgagcagctcgcg
gcggggttccgcgaggggatggaccggcagacgctgctgggcgtgactgggtccgggaaa
acgaacaccgtctcctggctgatcgaggagatccagcagcccaccctcgtcatcgcccac
aacaagacgctcgcggcccagctgtacgaggagttccgggagctgttcccggacaacgcc
gtcgagtacttcgtctcctactacgactactaccagcccgaggcgtacgtcgagcagtcg
gacacgttcatcgagaaggacgcctcgatcaacgacgagatcgaccgcctgcgccactcc
gcgacgcgctcgctgctcacccgcgaggacgtgatcgtcgtcgcctccgtctccgccatc
tacgggctgggtgacccgcggaactacgtcgacatgtccctgcgactcgagcagggccag
cagatcgaccgcgacgaactgctggggcggctggtcgacctgaactacgagcgcaacgac
gtcgacttcacgcagggcacgttccgcgtccggggcgacaccgtggaaatcttcccgatg
tacggccgctacgccgtgcgcgtggagttctggggcgacgagatcgaccgtatccggaaa
gtgaacaccctcgagggcgaggtcgtgagcgaggagccggccgtgctgctccacccggcg
gagcactactcgatcccggaggaccgcctgcaggaggcgatggccgagatcgaggagctg
atggaggaccgcgtgcgccacttcgagcgacagggcgacctcgtcgcggcccagcggatc
gaggagcgaaccacgttcgacctcgagatgctgcaggagacggggtactgctcggggatc
gagaactactcggtccacctctcggaccgcgagcagggggaggcgccgtacacgctgctc
gactacttccccgacgagttcctcaccgtcgtcgacgagtcccaccagacgctgccgcag
atccgcgggcagttcgagggcgacaaatcccgcaaggactcgctggtcgagaacgggttc
cgcctcccgaccgcttacgacaaccgcccgctcacgttcgaggagttcgaggcgaagacc
gacgagacgctgtacgtctcggcgacgccgggcgagtacgagcgcgaggagtccgaccag
atcgtcgaacagatcgtccgaccaacccatctcgtcgaccccgcggtcgaggtcacgagc
gcgcaggagcagatcgacgacctgatggaccgcatcgacgagcgcatcgagaacgacgag
cgcacgctcgtcaccacgctcaccaagcggatggccgaggatctcaccgagtacctcgag
gaggcgggcgtgaacgtcgcgtacatgcacgacgagaccgacacgctggagcgccacgag
atcatccgctcgctccgcctcggcgagatcgacgtactcgtgggtatcaacctcctccgt
gaaggactcgacatccccgaagtgagcctcgtcgcgatcctcgacgccgaccaggagggg
ttcctgcgctcggagacgatgctggtccagacgatgggtcgcgccgcgcggaacgtcaac
ggcgaggtggtgctgtacgccgacaagcgcaccgacgcgatgacgagcgccatcgaggag
acccgccggcgtcgggcgatccagcagcgctacaacgaggaacacgggttcgaaccgacc
acgatccagaaggagatcggcgagacgaacctcccggggagcaaaaccgacgcctccggc
gccgcgaacgcggaggtcggcgacgccgacgacgcggctcgccagatcgagcagttggag
gaccggatggaggaggcggccgacaacctcgagttcgaactcgcggcggacatccgcgac
cgcatcagggagctccgcgaggagttcgacctcgacggcggcgacgagggcgtcgcgccg
gaacccgacgcggagttctag
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