Halolamina sp. CBA1230: B4589_010150
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Entry
B4589_010150 CDS
T06651
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03022
Basal transcription factors
haln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4589_010150
09124 Replication and repair
03420 Nucleotide excision repair
B4589_010150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haln03021
]
B4589_010150
03036 Chromosome and associated proteins [BR:
haln03036
]
B4589_010150
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_010150
Enzymes [BR:
haln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
B4589_010150
Transcription machinery [BR:
haln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
B4589_010150
Chromosome and associated proteins [BR:
haln03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
B4589_010150
DNA repair and recombination proteins [BR:
haln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
B4589_010150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
Zot
ATPase
PhoH
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QKY20722
LinkDB
All DBs
Position
1920813..1922999
Genome browser
AA seq
728 aa
AA seq
DB search
MAETTRRFFPYDSPYPNQGEAMTRIAAALDDGDDVLFEGAPGTGKTLSALVPAIEHARQE
DRTVVITTNVHQQMRQFVEEARAINEEEEIRAVVFKGKSSMCHIGVDYQECQTLRDTTRE
LVEDQAEKQELEQQQRELLDASREGDAAAAQRREAVMEELDEVEERIEDVESANICEHYR
NNLLGDNEAFYEWLYDDVRTPEEIYKYAERENLCGYELLKEGMEAVDLVVCNYHHLLDPN
IREQFFRWLDREPERVVTVFDEAHNIESAARDHASRSLTENTLDGALDELDGRDDSRADA
AENVLRAFRDALVEVYEDGFAFGEREQVDENWSDVPIANDDARDDLTLAFLRNYEGRGID
TETELAVQLGETIDEEYEEAYKNGEATSRAESSTLAAARFLATWMEENAQLGQYPVVSVR
RDAGTEEVYGRAELYTCIPRRVTEALFDEVYASVLMSATLRPFDVAADVLGLDDPVTMAY
GLEYPEDRRRTYTAGTPALFANDRSDPEVQESVASLVSDVVEFTPGNTLLFFPSYSEAER
YYGRLGGSGQPVGDADGGDATLVLDGPDVDTEEQRERFVEGENAALFTSLWGTLAEGVSF
DGDDARTVAVVGVPYPHVDDRLEAVQDAYDRAYGGRDDAGWRYAVEIPTIRKTRQALGRV
IRSPDDFGVRVLADKRYTRADMGRYSVRDTFPEEERDELIDMNPEKLKFGLLNFYGDLGA
YDGERPRP
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacgacgcgacggttcttcccgtacgacagcccctacccaaaccagggcgag
gcgatgacccgcatcgccgccgcgctcgacgacggcgacgacgtgctgttcgagggcgcg
ccagggacgggtaagacgctctcggcgctcgtgccggcgatcgaacacgcccgacaggag
gaccgcaccgtcgtcatcacgaccaacgtccaccagcagatgcgccagttcgtcgaggag
gcccgcgcgatcaacgaggaggaggagatccgcgcggtcgtgttcaaggggaaatcgtcg
atgtgtcacatcggcgtcgactaccaggagtgccagaccctccgggacacgacccgcgaa
ctcgtcgaggaccaggctgagaagcaggaactcgaacagcagcagcgcgaactgctcgac
gccagccgcgagggcgacgccgccgcggcccagcgccgcgaggcggtgatggaggaactc
gacgaagtcgaggaacgcatcgaggacgtcgagagcgccaacatctgcgagcactaccgc
aacaacctgctcggcgacaacgaggcgttctacgagtggctctacgacgacgtccggacc
cccgaggagatctacaagtacgccgagcgggagaacctctgtggctacgaactgctgaag
gaggggatggaggcggtcgatctggtggtctgtaactaccaccacctgctcgaccccaac
atccgcgagcagttcttccggtggctggaccgcgagcccgagcgcgtggtgacggtgttc
gacgaggcccacaacatcgagtccgccgcgcgggaccacgccagccggagcctcaccgag
aacacgctcgacggcgcgctcgacgaactcgacggccgggacgactcccgtgccgacgcc
gccgagaacgtgctccgggcgttccgcgacgcgctggtcgaggtgtacgaggacgggttc
gcgttcggcgaacgcgagcaggtcgacgagaactggtcggacgtgcccatcgccaacgac
gacgcccgggacgacctcacgctcgccttcctccggaactacgagggccgcgggatcgac
accgagaccgaactcgcggtccagttgggcgagaccatcgacgaggagtacgaggaggcg
tacaagaacggcgaggcgacctcccgcgccgagagttccacgctcgccgccgcgcgcttc
ctcgcgacgtggatggaggagaacgcccaactcggccagtatcccgtggtctcggtccgc
cgggacgccggcaccgaggaggtctacggccgcgccgaactgtacacctgcatcccccgg
cgcgtgaccgaggcgctgttcgacgaggtgtacgcgagcgtcctcatgtccgcgaccctg
cgcccgttcgacgtcgccgccgacgtactgggactggacgaccccgtgacgatggcgtac
gggctggagtaccccgaggaccgccgccgcacgtacaccgcggggacgcccgcgctgttc
gcgaacgatcggagcgaccccgaggtccaggagtcggtcgcgtcgctcgtctccgacgtc
gtggagttcacgccggggaacacgctgctctttttcccctcttacagcgaggccgagcgc
tactacggccgactcggcgggtcgggccagccggtcggcgacgcggacgggggcgacgcc
acgctcgtgctcgacggtccggatgtcgacacggaggagcagcgggagcggttcgtcgag
ggcgagaacgcggcgctgttcacctcgctgtgggggacgctcgcggagggggtgagcttc
gacggcgacgacgcccggacggtcgcggtcgtcggcgtcccctacccgcacgtcgacgac
cggctggaggccgttcaggacgcgtacgaccgcgcctacggcggccgcgacgacgcgggc
tggcgctacgcggtcgagatcccgacgatccgcaagacccggcaggcgctggggcgcgtg
atccgctcgccggacgacttcggcgtgcgcgtgctcgcggacaagcgctacacccgggcg
gacatgggtcggtactccgtccgggacacgttccccgaggaggagcgcgacgaactcatc
gacatgaaccccgagaagctgaagttcgggctgctgaacttctacggcgacctgggcgcg
tacgacggcgagcggccgcggccctga
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