Halolamina sp. CBA1230: B4589_010460
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Entry
B4589_010460 CDS
T06651
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4589_010460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haln03021
]
B4589_010460
Transcription machinery [BR:
haln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
B4589_010460
Prokaryotic type
Archaeal type
TFB
B4589_010460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_tTFIIB
DZR
zf_Rg
DUF8054_C
Zn_ribbon_NUD
Trm112p
A2L_zn_ribbon
Auto_anti-p27
Cas12f1-like_TNB
DNA_ligase_ZBD
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QKY20778
LinkDB
All DBs
Position
complement(1985195..1986169)
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AA seq
324 aa
AA seq
DB search
MSTNITHRETETERAETEEEHHCPECGGNLQTDEAQAETVCADCGLVVDEDGIDRGPEWR
AFDAGEKDEKSRVGAPTTKMMHDDGLSTNIGWQNKDAYGNQLSASQREKMQRLRTWNERF
RTRDHKERNLKQALGEIDRMASALGLPENVRETASVIYRQALDKDLLPGRSIEGIATASL
HAAARMGNVPRSLDEMSAVSRVDQATFKRAYRYIVRELKLEVQPADPLEYLPRFASDLEL
DDETERRARELLETAKRQNVHSGKSPVGLAAAAIYAAGVLTNNALTQSEVSEATDMSEVT
IRNRYQELLQAAETADSGTAASPA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaacatcacccaccgcgaaaccgagaccgagcgggcagagaccgaggaggag
caccactgccccgagtgcggtggtaacctccagaccgacgaggcacaggccgagaccgtc
tgtgcggactgtggcctcgtcgtcgacgaagacggcatcgaccgcgggcccgagtggcgc
gcgttcgacgccggcgagaaagacgagaagtcccgtgtcggcgcgccgacgacgaagatg
atgcacgacgacgggctgtcgaccaacatcggctggcagaacaaggacgcctacggcaac
cagctctcggccagccagcgcgagaagatgcagcggctgcgcacgtggaacgagcggttc
cgcacccgcgaccacaaggagcgcaacctcaagcaggcgctgggcgagatcgaccggatg
gcctccgcgctcggcctcccggagaacgtccgcgagaccgcctcggtgatctaccgacag
gcgctggacaaggatctgctgcccggccgctcgatcgaggggatcgcgaccgcaagcctc
cacgccgcggcccggatggggaacgtcccccgcagcctcgacgagatgagcgccgtctcc
cgcgtcgaccaggcgacgttcaagcgcgcctaccgctacatcgtgcgggagctgaagctc
gaggtccagcccgccgacccgctggagtacctcccgcgctttgccagcgacctcgagctc
gacgacgagaccgagcgccgcgcgcgcgaactgctcgagaccgccaagcgccagaacgtc
cactccggcaagtcgccggtcggcctcgcggccgccgcgatctacgccgcgggcgtgctg
accaacaacgcgctgacccagagcgaggtcagcgaggcgaccgacatgagcgaagtcacc
atccgcaaccgctaccaggagctgctccaggccgccgagaccgcggactcgggtacggcc
gcgagcccggcctga
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