Halolamina sp. CBA1230: B4589_010605
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Entry
B4589_010605 CDS
T06651
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4589_010605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haln03000
]
B4589_010605
03021 Transcription machinery [BR:
haln03021
]
B4589_010605
Transcription factors [BR:
haln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
B4589_010605
Transcription machinery [BR:
haln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
B4589_010605
RNA polymerase III system
TFIIIB
B4589_010605
RNA polymerase I system
SL1/TIF-1B
B4589_010605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
QKY20807
LinkDB
All DBs
Position
2011085..2011645
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKETITIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQEPKSAALIFR
SGKIVCTGAKSTDDVHESLHIVFDKLRDLSIPIEDDPEITVQNIVTSADLGESLNLNAIA
IGLGLESIEYEPEQFPGLVYRLEEPDVVALLFGSGKLVITGGKQPDDAAEAVDVITERLD
ELGLLD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccaaggagacgatcaccatcgagaacgtcgttgcctcgacgggcatcggc
caggagctcgacctgcagagcgtcgcgatggatctggagggcgccgactacgaccccgaa
cagttcccaggcctcgtctaccgcacgcaggagcccaaatccgccgcgctgatcttccgc
tcgggaaagatcgtctgtaccggcgcgaagtcgaccgacgacgtccacgagagcctccac
atcgtcttcgacaagctccgtgatctgagcattccgatcgaggacgaccccgagatcacc
gtccagaacatcgtcaccagcgccgacctcggcgagagcctgaacctcaacgccatcgcg
atcggtctggggctggagagcatcgagtacgagccagagcagttccccggcctcgtctac
cggctggaggagcccgacgtcgtcgcgctgctgttcggctcggggaagctcgtcatcacc
ggcggcaaacagcccgacgacgccgccgaggccgtcgacgtgatcaccgagcgcctcgac
gagctcggtctgctggactga
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