Halolamina sp. CBA1230: B4589_011100 Help Entry B4589_011100      CDS       T06651                                  Name (GenBank) CDC48 family AAA ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism haln  Halolamina sp. CBA1230 Pathway haln04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:haln00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     B4589_011100  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:haln03019]     B4589_011100    03009 Ribosome biogenesis [BR:haln03009]     B4589_011100    04131 Membrane trafficking [BR:haln04131]     B4589_011100   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:haln04147]     B4589_011100 Messenger RNA biogenesis [BR:haln03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      B4589_011100 Ribosome biogenesis [BR:haln03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     B4589_011100 Membrane trafficking [BR:haln04131]  SNARE   SNARE associated proteins    Others     B4589_011100  Autophagy   Aggrephagy    Other aggrephagy associated proteins     B4589_011100 Exosome [BR:haln04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    B4589_011100 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N CDC48_2 AAA_2 AAA_5 AAA_14 TIP49 AAA_22 NPHP3_N AAA_33 nSTAND3 RNA_helicase AAA_28 AAA_7 IstB_IS21 DUF815 Mg_chelatase ABC_tran AAA_3 Sigma54_activat AAA_18 SLFN-g3_helicase NB-ARC Parvo_NS1 AAA_30 AAA_17 AAA_24 TsaE AAA_lid_PRS2_C AAA_19 AAA_11 NACHT PhoH bpMoxR NTPase_1 Zeta_toxin ATPase_2 Bac_DnaA Zot Motif Other DBs NCBI-ProteinID:  QKY20893 UniProt:  A0A7D4Y5R7 LinkDB All DBs Position 2094067..2096349 Genome browser AA seq 760 aa AA seqDB search MKLTVKPLKQKDAGRRLAAVDRVAADEMDLSGGDFIRIEGKQGAAIARVWPGYPEDDGTG VVRIDGRLRQEASVGIDDRVEVEPADVNPAESVTVALPQNMGIRGDIGGLVRKELSGQPV TAGQDVQLPLGFGLMGGQGQAVPLKIAETDPDGTVVITDSTEVEISQQPAEQIRDERGGA AGAGGAGSTEGPDVTYEDIGGLDDELEQVREMIELPMRHPELFSRLGIEPPKGVLLHGPP GTGKTLIAKAVANEIDASFHTISGPEIMSKYYGESEEQLREVFEEAQQESPAIIFMDELD SIAPQRDEAGGDVERRVVAQLLSLMDGLEERGELVVIGATNRVDAIDPALRRGGRFDREI EIGVPDTHGREEILQVHTRNMPLAEDVEIEELAENTHGFVGADLESLAKESAMIALRRFR PELDLEADEIDAETLERLDVTEADFKKALRGIEPSALREVFVEVPDITWEDVGGLEGTKE RLRETIQWPLDYPEVFEQMDVDSAKGVLLYGPPGTGKTLLAKAVANEAESNFISVKGPEL LDKYVGESEKGVREIFSKARENAPTVVFFDEIDAIATERGKNSGDSGVGERVVSQLLTEL DGLEELEDVVVVATTNRPDLIDSALIRPGRLDRHVHVPVPDEDARRAILEVHTREKPLAD DVDLDEIASRTDGFVGADLEALAREASMNATREFINSVSPEETVESVGNVRVTMDHFEDA LDEVVASVTDDTREQYQQIEERFQKSEPAEGTEPAAPTFQ NT seq 2283 nt NT seq  +upstreamnt  +downstreamnt atgaagctcactgtcaagccgctgaagcagaaagacgccggccgccgcctcgcggcggtc gatcgcgtcgccgccgacgagatggatctctccggcggcgacttcatccgcatcgagggg aagcagggcgccgccatcgctcgcgtctggccgggctacccggaggacgacggcaccggc gtcgtgcgcatcgatggccggctccgccaggaggccagcgtcggcatcgacgaccgcgtt gaggtcgagcccgccgacgtgaaccccgccgagagcgtcaccgtcgcgctcccccagaac atggggatccgcggtgacatcggcggcctcgtacgcaaggagctctcgggccagcccgtc accgccgggcaggacgtccagctcccgctggggttcggcctcatgggcgggcaggggcag gcagtcccgctgaagatcgccgaaaccgaccccgacgggacggtcgtgatcacggactcg actgaggtcgagatcagccagcagcccgccgagcagatccgcgacgagcgcggcggtgcc gcgggtgccggcggcgccgggagcaccgaaggccccgacgtgacctacgaggacatcggc ggcctcgacgacgaactcgagcaggtcagggagatgatcgagctcccgatgcgccacccc gagctgttcagccggctggggatcgagcccccgaagggcgtgctgctgcacggcccgccc ggcaccgggaagacgctgatcgccaaggccgtcgccaacgagatcgacgcctcgttccac actatctcgggccccgagatcatgtcgaagtactacggggagtccgaggagcagctgcgc gaggtgttcgaggaggcccagcaggagagccccgcgatcatcttcatggacgagctcgac tcgatcgcgccccagcgtgacgaggccggcggcgacgtggagcgccgcgtcgtggcccaa ctgctcagcctgatggacgggctggaggagcgcggggagctggtcgtcatcggcgccacc aaccgcgtcgacgccatcgaccccgcgctccgtcgcggtggccgcttcgaccgcgagatc gagatcggcgtgcccgacacccacggccgcgaggagatcctgcaggtccacacgcgcaac atgccgctggcggaggacgtggagatcgaggagctcgcggagaacacccacgggttcgtc ggcgccgacctggagtcgctggccaaggagtccgcgatgatcgcgctccggcggttccgc cccgaactcgacctcgaggcggacgagatcgacgcggagacgctggaacgactcgacgtc accgaggccgacttcaagaaggcactccgcgggatcgaacccagcgcactccgggaggtg ttcgtcgaggtgcccgacatcacctgggaggacgtcggcggcctcgaaggcacgaaggag cgcctgcgcgagacgatccagtggccgctcgactaccccgaggtgttcgagcagatggac gtcgacagcgcgaaaggcgtgctgctgtacggtccgcccggcaccgggaagacgctgctc gcgaaagcggtggccaacgaggccgagagcaacttcatctcggtgaaagggccggagctg ctggacaagtacgtcggcgagtccgagaagggcgtccgcgagatcttcagcaaggcccgc gagaacgccccgacggtggtgttcttcgacgagatcgacgccatcgcgaccgagcgcggg aagaactccggcgactccggcgtcggcgagcgcgtcgtctcccagctcctcacggagctc gacggactcgaggaactggaggacgtggtggtcgtcgccaccacgaaccgtccggacctg atcgacagcgcgctgatccgccccggccggctggaccgccacgtccacgtgcccgtgccc gacgaggacgcccgccgcgcgatcctcgaggtgcacacccgcgagaagccgctggccgac gacgtggatctcgacgagatcgcgagccgcaccgacgggttcgtcggcgcggacctcgag gcgctggcccgcgaggcgtcgatgaacgccacccgggagttcatcaacagcgtctcgccc gaggagaccgtcgagagcgtggggaacgtccgcgtgacgatggaccacttcgaggacgcg ctcgacgaggtggtggcctccgtcaccgacgacacccgcgagcagtaccagcagatcgag gagcgtttccagaagagcgaacccgccgaggggaccgagcccgcggcgccgacgttccag taa

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