Halolamina sp. CBA1230: B4589_011360
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Entry
B4589_011360 CDS
T06651
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B4589_011360 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_011360 (mutS)
DNA repair and recombination proteins [BR:
haln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
B4589_011360 (mutS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QKY20942
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Position
complement(2147732..2150422)
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AA seq
896 aa
AA seq
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MSAVTGPPTELDERRDELTPMLQQYVDRCREHDDALVLFRVGDFYKTFCEIAEEVARLCE
LTMIEREDSTGTYDAAGIPVDNAAEYVERLLDAGHRVAIADQVEDPSETNGIVERAVTQI
ITPGTVVDDELLSPDSTYVTAVVGAEESEEFAVASVDVSTGECRVAAVADRAGAREEIAR
VGPAELLAGPDASEINPDCPVTDWGGDAFTVEEARETLDSYADPDRFATVAVRAVGGLLA
YAEYTQGDDGPLDYVSRVQRYDPADCLRLDAAALRSLELFENRAGGDRDGDTLFETVNET
VCALGRRRLASWLRRPLVDRRAIEARLDAVDELSTRTLLREELRDELGAAYDLERLVSRI
SRERANARDLRSVAGTLAIVPELKAALEDADSDRLGRLRDDLDELAEIRELIESAVAEDP
PQEITEGGVIRDGFDEELDEVRATEREGREWVADLEAKERERTGIDNLDVGHNQVHGYYI
EVTDSHLDDVPEEYRRRQTLKNSERFVTPELRRREDEILGAAERADALEYDIFREVRAEV
ADAADRLQGLADDLADLDALLSLSTVAVGPDFCRPTFHDGDQPLEIEAGRHPVVAQAQEE
FVPNDAELPAGSVALVTGPNMSGKSTYMRQVGLICVLAQAGGFVPAQSANLPVLDRVFTR
VGASDDIAGGQSTFMREMSELTDILHDATADSLVLLDEVGRGTSTADGLAIARAATEFLH
DEVGARTMFATHYHDLTALADERERVFNLHFTAIRDGDDVTFLHRVDEGPSSSSYGVEVA
RMAGVPEPVVDRSRELVEDDETAAEATTDPAPEPTQAATDGAGVDSGAEAGAGSEPSDPD
AAPSPPPGQQTLPGTEPEGAKADEVAAELRELDLARTTPIEALNRLQELQNRVTDE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggtcaccgggcccccaacggagctcgacgagcgccgtgacgagctcacgccg
atgctccagcagtacgtcgatcgctgccgggagcacgacgacgcgctcgtgctgttccgg
gtgggggatttctacaagacgttctgcgagatcgccgaggaggtcgcccggctctgcgag
ctcacgatgatcgagcgggaggactccacgggcacctacgacgcggcggggatccccgtc
gacaacgccgcggagtacgtcgaacgcctgctcgacgccggccaccgtgtcgccatcgcc
gatcaggtcgaggaccccagcgagaccaacgggatcgtcgagcgcgcggtcacccagatc
atcacccccggcaccgtcgtcgacgacgaactgctctcgccggattcgacgtacgtgacg
gcggtcgtcggcgccgaggagagcgaggagttcgcggtcgccagcgtcgacgtctccacc
ggcgagtgtcgggtcgccgccgtggccgaccgagcgggcgcacgcgaggagatcgcccgc
gtcggccccgcggaactgctcgcgggcccggacgcatccgagataaatcccgactgcccg
gtcaccgactggggcggcgacgcgttcaccgtcgaggaagcccgggagacgctcgattcc
tacgccgacccggatcggttcgcgacggtcgcggtccgcgcggtgggcggcctcttggcg
tacgccgagtacacgcagggcgacgacggcccgctcgactacgtctcgcgggtgcagcgc
tacgaccccgccgactgcctgcggctggacgccgccgcactgcgcagcctcgaactgttc
gagaaccgcgcgggcggcgaccgcgacggcgacacgctgttcgagacggtgaacgagacg
gtctgtgcgctggggcgccgccggctggcgtcgtggctccgccggccgcttgtcgaccgc
cgggcgatcgaagccagactcgacgccgtcgacgaactgtcgacccggacgctcctccgc
gaggagctccgcgacgaactcggcgccgcatacgacctcgaacggctggtgtcacggatc
tcccgcgaacgtgcgaacgcccgcgacctgcgctcggtcgccgggacgctcgcgatcgtg
ccggagctgaaggcagcgctcgaggacgccgactccgaccgcctcgggcgactccgcgac
gacctcgacgaactcgcggagatccgggagctgatcgagagcgcggtcgccgaggacccg
ccccaggagatcaccgagggcggcgtgatccgcgacgggttcgacgaagagctcgacgag
gtgcgcgcgaccgaacgcgaggggcgggagtgggtcgccgacctcgaagcgaaggagcgc
gagcggacggggatcgacaacctcgacgtcggccacaaccaggtccacggctactacatc
gaggtgaccgacagccacctcgacgacgtgcccgaggagtaccgccggcgccagacgctg
aagaactcggaacggttcgtcacgcccgagctccgccggcgcgaggacgagatcctgggc
gccgccgagcgcgccgacgcgctggagtacgacatcttccgtgaagtccgcgccgaggtc
gccgacgcggcggaccgcctgcaggggctcgcggacgacctcgccgatctcgatgcgctg
ctctcgctttcgaccgtcgccgtcggcccggatttctgccgacccacgttccacgacggc
gaccagccactcgagatcgaggccgggcgccaccccgtggtcgcacaagcccaggaggag
ttcgtccccaacgacgccgaactgcccgcgggcagcgtcgcgctcgtcaccggcccgaac
atgagcgggaagtcgacgtacatgcggcaggtcggcctgatctgcgtgctcgcgcaggcg
ggcgggttcgtgcccgcacagtccgcgaacctgcccgtgctggatcgggtgttcacccgc
gtcggcgccagcgacgacatcgcgggcgggcagtcgacgttcatgcgcgagatgagcgaa
ctcacggacatcctccacgacgccaccgcggactcgctggtgctgctggacgaggttggc
cgtggcacctccaccgccgacggcctcgcgatcgcccgcgcggcgacggagttcctccac
gacgaggtcggcgcccggacgatgttcgcgacccactaccacgacctgaccgcgctggcc
gacgagcgcgaacgggtgttcaatctgcacttcaccgcgatccgggacggtgacgacgta
acgttcctccaccgcgtcgacgaggggccgtcctcctcctcgtacggcgtcgaagtcgca
cggatggcgggcgttccggagccagtcgtcgaccgctcgcgggagctggtcgaggacgac
gagacggctgcggaggcgacgaccgacccggcgccggaaccgacgcaggccgccactgac
ggcgcgggcgtcgattcgggtgcggaggccggcgcgggctccgaaccgtccgatccggac
gccgccccctccccacccccgggccagcagacgctgcccggaaccgagccggagggcgcc
aaagccgacgaggtcgcggccgaactccgcgagctcgacctcgctcggaccacccccatc
gaggcgttgaaccgcctacaggagctccagaaccgcgtcacggacgaatga
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