Halolamina sp. CBA1230: B4589_012870
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Entry
B4589_012870 CDS
T06651
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03030
DNA replication
haln03420
Nucleotide excision repair
haln03430
Mismatch repair
haln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B4589_012870
03420 Nucleotide excision repair
B4589_012870
03430 Mismatch repair
B4589_012870
03440 Homologous recombination
B4589_012870
03460 Fanconi anemia pathway
B4589_012870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haln03000
]
B4589_012870
03032 DNA replication proteins [BR:
haln03032
]
B4589_012870
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_012870
Transcription factors [BR:
haln03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
B4589_012870
DNA replication proteins [BR:
haln03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
B4589_012870
DNA repair and recombination proteins [BR:
haln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
B4589_012870
MMR (mismatch excision repair)
B4589_012870
DSBR (double strand breaks repair)
HR (homologous recombination)
B4589_012870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
SSB
Motif
Other DBs
NCBI-ProteinID:
QKY21219
UniProt:
A0A7D4YBD6
LinkDB
All DBs
Position
2434531..2435946
Genome browser
AA seq
471 aa
AA seq
DB search
MSAIDDVHEELDADVSAEEFEEMVAEKVEEMGGLADDETAAMLVAHELEDEGGEVESVAD
IEPGMDDVKFVAKLISIGEKRTFERDGDQPDGQVVNTEVADESGRIRLSLWDEMAESALE
ELAEGDVLRIAGRPKEGYNGVEVSADKAEIEPDVDIDVSVSDSYDVEELSMGLSDVTLVG
KLLDVDDDYRTFDRDDGTEGRVANVAIGDETGRIRVTLWDEATDLLEELEAGEVVEVVDG
YVRERDGDLELHVGSRGTIEAVDEDVEYAPETTDIDDVEMGDTVDIAGAVIETDDKRTFD
RDDGSQGQVRNVRVRDDTGDIRVALWGEKADRDVTLADRVAFTDVEIQDGWQDELEASAG
WQSTVSILDGEADVEGADDRDEKAPPSAEQGGLSAFGEDGDGADELREEETTADGEEVEF
TGTVVQSGSPVVVDNGEETRSVETGESVQLGEEVTVRGVEHDGRIDADELL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccatcgacgacgtccacgaggagctcgacgcggacgtctccgccgaggagttc
gaggagatggtggcggagaaagtcgaggagatgggtggcctcgcggacgacgagacggcg
gcgatgctcgtcgcccacgagctggaggacgagggcggcgaggtcgagagcgtcgcggac
atcgaacccggcatggacgacgtgaagttcgtcgcgaagctgatctccatcggcgagaaa
cgcacgttcgagcgcgacggcgaccagcccgacggccaggtcgtcaacaccgaggtcgcc
gacgaatcggggcggatccggctctcgctgtgggacgagatggccgaatccgcgctcgag
gaactggcggagggcgacgtgctccgcatcgcaggccgacccaaggaggggtacaacggc
gtcgaggtctccgccgacaaggccgagatcgaacccgacgtcgatatcgacgtctccgtg
agcgacagctacgacgtcgaggagctctcgatggggctctccgacgtcactctcgtcggc
aaactgctcgacgtggacgacgactaccgcacgttcgaccgcgacgacggcaccgagggc
cgcgtcgccaacgtcgccatcggcgacgagacgggtcgcatccgcgtcacgctctgggac
gaggccacggacctgctcgaggaactcgaggccggcgaggtcgtcgaggtcgtcgacggc
tacgtccgcgagcgcgacggcgacctcgaactccacgtcggctcccgggggaccatcgag
gcagtcgacgaggacgtcgagtacgcccccgaaacgacggatatcgacgacgtggagatg
ggcgacaccgtcgacatcgccggcgccgtgatcgagaccgacgacaagcgcacgttcgac
cgcgacgacggctcgcagggccaggtccggaacgtccgcgtccgcgacgacacgggcgac
atccgggtcgcgctctggggcgagaaagccgaccgcgatgtcacgctcgccgaccgcgtc
gcctttaccgacgtggagatccaggacggctggcaggacgagctcgaagcctccgcgggc
tggcagtccaccgtctcgatcctcgacggcgaggccgacgtggagggcgccgacgaccgc
gacgagaaggcgcccccctcggccgagcagggcgggctctcggcgttcggcgaggatggt
gatggggcggacgaactccgcgaggaggagacgacggccgacggtgaggaggtagagttc
accggcacggtcgtccagtccggcagccccgtcgtggtcgacaacggcgaggagacccgc
agcgtcgagacgggcgagagcgtccagctcggcgaggaggtgacggtccgcggcgtcgaa
cacgacggccgcatcgacgccgacgaactgctctaa
DBGET
integrated database retrieval system
