Halolamina sp. CBA1230: B4589_013290
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Entry
B4589_013290 CDS
T06651
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
haln
Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haln03016
]
B4589_013290 (thpR)
Enzymes [BR:
haln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B4589_013290 (thpR)
Transfer RNA biogenesis [BR:
haln03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B4589_013290 (thpR)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QKY21298
UniProt:
A0A7D4Y8D6
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All DBs
Position
2515458..2516033
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AA seq
191 aa
AA seq
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MRLFFAIDLPDDLREPFAALQDDLAAAEGLNFTDPDQAHLTMKFLGDTPTEDEADEEPTV
GDAKAAGAAAVNAADLDPFEMEVGSLGAFPSEEYISVVWAGVRDGAADLESLAAALETEA
TDRGFEEADNPFTPHVTLARMNDARGKDLVQDRIRNTDPTVGRFTAEELRLKRSVLGDDG
AEHETIARFSL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcttcgcgatcgacctgcccgacgacctccgcgagccgttcgcggcgcta
caggacgacctcgcggctgcggaggggctgaacttcaccgaccccgaccaggcgcacttg
acgatgaagtttctcggggatacccccacggaggacgaggccgacgaggagccgacggtc
ggcgacgcgaaagccgccggcgcggcggcggtcaacgcggccgatctcgacccgttcgag
atggaggtcggcagcctcggcgcgttcccgtccgaggagtacatctcggtggtctgggcg
ggcgtgcgcgacggcgccgccgacctcgaatcactcgcggccgcactcgaaacggaggcc
accgacagagggttcgaggaagcggacaaccccttcacgccccacgtcacgctcgcccgc
atgaacgacgctcgcgggaaggacctcgtgcaggaccgaatccggaacaccgatccgacg
gtcggccgcttcacggccgaggagctccgcctgaagcgctcggtcctcggcgacgacggc
gcggagcacgagacgattgcgcggttctcgctctaa
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