Halolamina sp. CBA1230: B4589_013435
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Entry
B4589_013435 CDS
T06651
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B4589_013435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haln03021
]
B4589_013435
Enzymes [BR:
haln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B4589_013435
Transcription machinery [BR:
haln03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
B4589_013435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QKY21324
UniProt:
A0A7D5C6K6
LinkDB
All DBs
Position
2548243..2551173
Genome browser
AA seq
976 aa
AA seq
DB search
MSISGSPKEIGEISFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGL
ECRTCGQHSGSCNGHFGHIELAAPVIHVGFAKLIRRLLRGTCRDCGRLSLTEDEQAEFAD
RLERAKELDDDPDDVLKAAIRQARKTSRCPYCGETQYDIKHEKPTTYYEVQDVLAAEYSE
IIAEAMQPDEDEEDDAGVAPQELADETGIALDRVNDILSGEFRPREEDRKALEKALDVDL
TEEDENKLMPSDIRDWFEDIPDEDLANIGVNPETSRPEWMILTVLPVPPVTTRPSITLDN
GQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFVDNEISGTPPA
RHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERVAREM
TQTMNVSERNLEEARTYVRNGPQGHPGANYVKRPDGRRLKVTEKNCEELAEKVEPDWEVS
RHLTDGDIIVFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCTPYNADFDGDEMNMHALQ
NEEARAEARVLMRVQEQMLSPRFGENIIGAIQDHVSGTYLLTRNNPEFTENQALDLLRAT
SVDELPEPDGQDDGEPVWTGRTVFSELLPDDLNLEFRSEADDEVVIEDGQLKQGTIDEGA
IGAFGGDIVDTITKEYSKTRARVFVNEVATLAMRSIMHFGFSIGIDDESIPPEAGEQVDE
AIDDAYERVDELIETYRAGDLNSIPGRTVDETLELKIMQTLGKARDSAEDIASDHFADDN
PAIVMASSGARGSMLNLTQMAATVGQQSVSGERINRGYEGRTLSHYERGDLGAKPHGFVE
NSYRSGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGTVRDTSG
TVVQFEFGEDGTSPVKVASDEDDPVDVESITQRVLDKEFSSEEQKKRFLGERSETTNLSE
YAGPGLNKAGQGVTDD
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatctcaggctcacccaaggagatcggcgagatcagcttcggcctgatggacccg
gagacgtaccgggacatgagcgccacgaaggtgatcaccgccgacacgtacgacgacgac
ggctaccccatcgacatggggctgatggacccccggctgggggttatcgaccccgggctg
gagtgccggacctgcgggcagcactccggctcgtgtaacggccacttcggacatatcgag
ctcgcggcgccggtgatccacgtcggcttcgcgaagctgatccgccgcctgctgcgtggc
acctgtcgggactgcggccggctctcgctcaccgaggacgagcaggccgagttcgccgac
cggctcgagcgcgcgaaggagctggacgacgaccccgacgacgtgctgaaggccgccatc
cggcaggcccggaagacctcgcggtgtccgtactgcggcgagacccagtacgacatcaaa
cacgagaagccgacgacctactacgaggtccaggacgtcctcgccgcggagtactccgag
atcatcgccgaggcgatgcagcccgacgaggacgaggaggacgacgccggcgtcgcgccc
caggagctcgccgacgagaccggcatcgcgctcgaccgggtcaacgacatcctcagcggc
gagttccggccgcgcgaggaggaccgcaaggcgctggagaaggcgctggacgtcgacctg
accgaggaggacgagaacaagctgatgcccagcgacatccgggattggttcgaggacatc
ccggacgaggacctcgcgaacatcggcgtcaaccccgagacctcccggcccgagtggatg
atcctgacggtgctgccggtgccgccggtcaccacccgcccctcgatcacgctggacaac
ggccagcgctccgaggacgacctcacccacaagctggtcgacatcatccgcatcaaccag
cggttcatggagaaccgcgaggcgggtgcgccccagctgatcatcgaggacctctgggag
ctgctgcagtaccacgtcaccacgttcgtcgacaacgagatctccggcacgccgccggcc
cggcaccgctccggccggccgctgaagaccctctcccagcgcctgaaggggaaggagggt
cgcttccgtggctcgctgtccgggaagcgcgtgaacttctcggcgcgaaccgtcatctca
ccggacccgacgctgtcactgaacgaggtcggcgtccccgagcgcgtggctcgggagatg
acccagacgatgaacgtctccgagcgcaaccttgaggaggcgcgcacgtacgtccggaac
ggcccccagggccaccccggcgcgaactacgtcaagcggcccgacggccgccggctgaag
gtgaccgagaagaactgcgaggagctcgccgagaaggtcgagcccgactgggaggtctcc
cgccacctgaccgacggcgacatcatcgtgttcaaccgacagccgtcgctgcaccggatg
tcgatcatggcccacgaggtggtcgtgatgccgtacaagacgttccggctgaacacgacg
gtgtgtacgccgtacaacgccgacttcgacggcgacgagatgaacatgcacgcgctccag
aacgaggaggcgcgtgccgaggctcgcgtgctgatgcgcgtccaggagcagatgctcagc
ccgcgcttcggcgagaacatcatcggcgccatccaggaccacgtctccggcacgtatctg
ctgacccggaacaaccccgagttcaccgagaaccaggcgctggacctgctgcgtgcgacc
agcgtcgacgagctgcccgagcccgacggccaggatgacggcgagcccgtctggaccggg
cgcaccgtgttctcggagctgctccccgacgacctcaacctcgagttccgctccgaggcc
gacgacgaggtcgtgatcgaggacggccagctcaaacagggcaccatcgacgagggcgcc
atcggcgcgttcggcggcgacatcgtcgacaccatcaccaaggagtactcgaagacccgc
gcccgcgtgttcgtcaacgaggtggcgacgcttgcgatgcgctcgatcatgcacttcggg
ttctcgatcgggatcgacgacgagtcgatcccgccggaggcgggcgagcaggtcgacgag
gcgatcgacgacgcctacgagcgcgtcgacgagctgatcgagacgtaccgcgcgggcgat
ctgaactcgatccccggccgcaccgtcgacgagacgctcgagctgaagatcatgcagacg
ctcggcaaggcgcgtgactcggcggaggacatcgccagcgaccacttcgccgacgacaac
cccgccatcgtgatggcgagctccggcgcgcgtgggtcgatgctgaacctgacccagatg
gccgccaccgtcggccagcagtccgtcagtggcgaacgcatcaaccgcgggtacgagggc
cgcacgctcagccactacgagcgcggcgacctcggcgccaaaccccacgggttcgtggag
aactcctaccgctcggggctgaccccgcgggagttcttcttccacgccatgggtggccgc
gaggggctggtcgacacggcagtccggacgtcgaagtccggctacctccagcgccggctg
atcaacgcgctctccgaactcgaggcgcagtacgacggcaccgtgcgggacacctccggc
acggtcgtccagttcgagttcggcgaggacggcacctcgccggtgaaagtcgcttccgac
gaggacgaccccgtcgacgtggagtcgatcacccagcgcgtgctggacaaggagttcagc
agcgaggagcagaagaagcggttcctgggcgagcgcagcgagacgaccaacctctctgag
tacgccggtcccggcctgaacaaggcgggccagggggtgaccgatgactga
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