Halolamina sp. CBA1230: B4589_014570
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Entry
B4589_014570 CDS
T06651
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4589_014570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haln03021
]
B4589_014570
Transcription machinery [BR:
haln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
B4589_014570
Prokaryotic type
Archaeal type
TFB
B4589_014570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_LysW
DUF8106
A2L_zn_ribbon
Zn_Ribbon_YjdM
Lar_restr_allev
Sigma70_r4
Zn_ribbon_9
Zn_ribbon_PaaD
Ribosomal_S27e
Zn_ribbon_tTFIIB
Zn_ribbon_3
Zn_ribbon_Elf1
Cyclin_C
DUF7340
Cas12f1-like_TNB
zf_Tbcl
Motif
Other DBs
NCBI-ProteinID:
QKY21537
LinkDB
All DBs
Position
2788562..2789521
Genome browser
AA seq
319 aa
AA seq
DB search
MERPSRERQRESEDEDESAADEVLTCPECGSDEVITDDDQGELVCDDCGLVLDERQIDRG
PEWRAFNHSERQSKSRVGAPITETMHDRGLTTTIDWKDKDAYGRSLSSEKRSQMHRLRKW
QERIRTKDAGERNLQFALSEVDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEGVA
TAALYAACRQEGIPRSLDEVAEVSRVPQKEIGRTYRYISQELGLELKPVDPKQFVPRFAS
ELGLSEEVQSKATEIIDVSAEQGLLSGKSPTGFAAAAIYAASLLCNEKKTQREVADVAQV
TEVTIRNRYQEQIEAMGFR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtccgagccgggagcgacagcgggagtccgaggacgaggacgagtcggcggcc
gacgaggttctcacctgcccggagtgcgggtcagacgaggtcatcaccgacgacgaccag
ggcgaactcgtctgtgacgactgcggactggtgctcgacgagcgccagatcgaccgcggc
ccggagtggcgggcgttcaaccactccgagcgccagagcaaatcccgcgtcggtgcgccg
atcaccgagacgatgcacgaccgcgggctgacgacgacgatcgactggaaggacaaggac
gcctacggtcgatcgctgtcctccgagaagcgcagtcagatgcaccggctgcggaagtgg
caggagcgcatccggacgaaggacgcgggcgagcggaacctccagttcgcgctctcggag
gtcgaccgcatggcctccgcactcggtgtcccgcgttcggtccgggaggtcgcgtcggtg
atctaccgtcgcgcgctcaacgaggacctgatccggggacgctcgatcgagggcgtcgcc
accgccgcgctgtacgcggcctgccgacaggaggggatcccgcgcagcctcgacgaggtc
gcggaggtctcccgcgtgccccagaaggagatcggccgcacctaccgctacatctctcag
gagctcggcctcgagctcaagcccgtcgaccccaagcagttcgtcccgcgctttgcctcc
gagctcggcctgagcgaggaggtccagtcgaaggcgaccgagatcatcgatgtctccgcc
gagcaggggctgctctcggggaagtcaccgacgggctttgccgccgcggcgatctacgcg
gcgtcgctgctctgtaacgagaagaagacccagcgcgaggtcgccgacgtggcccaggtg
acggaggtcaccatccggaaccgctaccaggaacagatcgaagcgatgggcttccggtag
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integrated database retrieval system
