Halolamina sp. CBA1230: B4589_014690
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Entry
B4589_014690 CDS
T06651
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03030
DNA replication
haln03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B4589_014690 (fen)
03410 Base excision repair
B4589_014690 (fen)
03450 Non-homologous end-joining
B4589_014690 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haln03032
]
B4589_014690 (fen)
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_014690 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haln04147
]
B4589_014690 (fen)
DNA replication proteins [BR:
haln03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
B4589_014690 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
B4589_014690 (fen)
DNA repair and recombination proteins [BR:
haln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
B4589_014690 (fen)
Exosome [BR:
haln04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
B4589_014690 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
OrfB_IS605
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QKY21560
UniProt:
A0A7D5C2R6
LinkDB
All DBs
Position
2806984..2807964
Genome browser
AA seq
326 aa
AA seq
DB search
MGNADLRDVAAIEDVSFDSLSGSVVAVDAHNWLYRYLTTTVKFTADSVYTTADGDEVANL
VGVVQGLPKFFEHDVTPVFVFDGGVTDLKSDEVERRREQREQAEQRRQEAEEAGEAVEAA
RLDARTQRLTDTIHETTRGLLDRLDVPYIEAPAEGEAQCAHMAAVDDVDYAGSEDYDTMV
FGAPRTLRQLTSKGDPELMDLGKTLEKHDITYEQLVDVALLMGTDFNEGVSGYGPKTAVT
AIKEHGDVWGVMEADDVYVENADRIRELFFDPPVTDEYEIDLDVDPDIDAAKRYVTEAWE
VDADEVERGFERIEESLVQTGLDDWT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgcggatctccgcgacgtggcggccatcgaggacgtgtccttcgactcgctc
tcggggagcgtcgtcgccgtcgacgcacacaactggctctaccgctacctgacgacgacg
gtgaagttcaccgccgactcggtgtacaccaccgccgacggcgatgaggtcgcgaacctc
gtcggcgtcgtgcaggggctgccgaagttcttcgagcacgacgtgacgccggtgttcgtg
ttcgacggcggcgtcaccgacctcaagagcgatgaggtcgagcgccggcgcgaacagcgc
gagcaggccgaacagcgccggcaggaggccgaggaggccggcgaagccgtcgaagccgca
cgactggacgcccgcacccaacgcctgaccgatacgatccacgagaccacccgcgggctg
ctcgacaggctcgacgtgccgtacatcgaggcgccggcggagggggaggcgcagtgtgcc
cacatggccgccgtcgacgacgtggactacgccggcagcgaggactacgacacgatggtg
ttcggcgcgccgcggacgctgcgccagctcacctcgaagggcgacccggagctgatggat
ctcgggaagacgctggagaaacacgatatcacctacgaacagctcgtcgacgtggcgctg
ctgatggggacggacttcaacgagggcgtcagcggctacggccccaagacggcagtcacg
gcgatcaaggaacacggcgacgtctggggtgtgatggaggccgacgacgtgtacgtcgag
aacgccgaccggatccgggagctgtttttcgacccgccggtcaccgacgagtacgagatc
gacctcgacgtcgaccccgacatcgacgccgcgaaacggtacgtgaccgaggcgtgggag
gtcgacgccgacgaggtcgaacgcggcttcgagcggatcgaggagtcgctggtccagacc
gggctcgacgactggacgtag
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integrated database retrieval system