KEGG   Halolamina sp. CBA1230: B4589_014690
Entry
B4589_014690      CDS       T06651                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
haln  Halolamina sp. CBA1230
Pathway
haln03030  DNA replication
haln03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:haln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B4589_014690 (fen)
   03410 Base excision repair
    B4589_014690 (fen)
   03450 Non-homologous end-joining
    B4589_014690 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haln03032]
    B4589_014690 (fen)
   03400 DNA repair and recombination proteins [BR:haln03400]
    B4589_014690 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:haln04147]
    B4589_014690 (fen)
DNA replication proteins [BR:haln03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    B4589_014690 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     B4589_014690 (fen)
DNA repair and recombination proteins [BR:haln03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     B4589_014690 (fen)
Exosome [BR:haln04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   B4589_014690 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc OrfB_IS605 HTH_RNase_II
Other DBs
NCBI-ProteinID: QKY21560
UniProt: A0A7D5C2R6
LinkDB
Position
2806984..2807964
AA seq 326 aa
MGNADLRDVAAIEDVSFDSLSGSVVAVDAHNWLYRYLTTTVKFTADSVYTTADGDEVANL
VGVVQGLPKFFEHDVTPVFVFDGGVTDLKSDEVERRREQREQAEQRRQEAEEAGEAVEAA
RLDARTQRLTDTIHETTRGLLDRLDVPYIEAPAEGEAQCAHMAAVDDVDYAGSEDYDTMV
FGAPRTLRQLTSKGDPELMDLGKTLEKHDITYEQLVDVALLMGTDFNEGVSGYGPKTAVT
AIKEHGDVWGVMEADDVYVENADRIRELFFDPPVTDEYEIDLDVDPDIDAAKRYVTEAWE
VDADEVERGFERIEESLVQTGLDDWT
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggcaacgcggatctccgcgacgtggcggccatcgaggacgtgtccttcgactcgctc
tcggggagcgtcgtcgccgtcgacgcacacaactggctctaccgctacctgacgacgacg
gtgaagttcaccgccgactcggtgtacaccaccgccgacggcgatgaggtcgcgaacctc
gtcggcgtcgtgcaggggctgccgaagttcttcgagcacgacgtgacgccggtgttcgtg
ttcgacggcggcgtcaccgacctcaagagcgatgaggtcgagcgccggcgcgaacagcgc
gagcaggccgaacagcgccggcaggaggccgaggaggccggcgaagccgtcgaagccgca
cgactggacgcccgcacccaacgcctgaccgatacgatccacgagaccacccgcgggctg
ctcgacaggctcgacgtgccgtacatcgaggcgccggcggagggggaggcgcagtgtgcc
cacatggccgccgtcgacgacgtggactacgccggcagcgaggactacgacacgatggtg
ttcggcgcgccgcggacgctgcgccagctcacctcgaagggcgacccggagctgatggat
ctcgggaagacgctggagaaacacgatatcacctacgaacagctcgtcgacgtggcgctg
ctgatggggacggacttcaacgagggcgtcagcggctacggccccaagacggcagtcacg
gcgatcaaggaacacggcgacgtctggggtgtgatggaggccgacgacgtgtacgtcgag
aacgccgaccggatccgggagctgtttttcgacccgccggtcaccgacgagtacgagatc
gacctcgacgtcgaccccgacatcgacgccgcgaaacggtacgtgaccgaggcgtgggag
gtcgacgccgacgaggtcgaacgcggcttcgagcggatcgaggagtcgctggtccagacc
gggctcgacgactggacgtag

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