Halolamina sp. CBA1230: B4589_015040
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Entry
B4589_015040 CDS
T06651
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
haln
Halolamina sp. CBA1230
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haln03400
]
B4589_015040
DNA repair and recombination proteins [BR:
haln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B4589_015040
Archaeal homologous recombinant proteins
B4589_015040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
AAA_13
AAA_27
AAA_29
Laminin_II
DUF1664
SMC_N
Phage_GP20
DUF3450
FapA
CCDC93_CC
DUF948
CENP-F_leu_zip
DUF4618
ABC_tran
MscS_porin
DNA_ligase_ZBD
DUF3584
DUF4200
Motif
Other DBs
NCBI-ProteinID:
QKY21625
UniProt:
A0A7D5CI13
LinkDB
All DBs
Position
complement(2864898..2867594)
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AA seq
898 aa
AA seq
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MKFDRLRLRNFKPYADTDLQFTDGVTVIHGLNGSGKSSLLEACFFALYGSQALDGTLDDA
VTTGAEETDVELWFTHAGEEYKITRELRRSGGSVSTRTCVLEGADTTVEGARDVREFVGE
ELLRMDSEAFRNCAYIRQGEVNRLINASPRERREMIDDLLQLGKLEEYRERARDARLGVE
DVLGDKRGGLNKLEEQIEAKEAKELHERLNELESELAELDSEIERFEGNREEARETRDEA
QSIVDEAEEQESELEELNEEIEELEASIRETENEREELLDEITEIRERIDEREAELDELA
DAAGVDAATEEAVAQAREELDDSEADLREQREDARDRVSDLENEVESLESEAERLRERAG
EKRDRADELESEADDAEDDLEDVRTKLDEVAEERESIAARFADAPVEMGEAEEHREQLRE
ELDEVQEAIEETVGDLASARDRVEEAEELLEQGNCPECGQPVEDSPHVDALEADRERVEE
LSAELGELNGRKADLKEEIETAEELVDAESRAESLDERREMLEERTDGLESEVESDRAEA
EELREEAEELEAEAKETETEAEEMESEAEAARERVAELEEELDALDEHRDRLDAVEEALA
AIEGDEDEIDRLRERRESKAELAAERRDRLDDLRERRDELREQFDRDRVEQARKKRESAE
EYLEKVENKLDSLAEQRDELTGEIGSVENEIEELEALREDREELAETVADLESLHEETEE
LERTYGDLRAELRQRNVESLERMLNETFDLAYGNDAYSHIELDGEYELTVYQKDGTPLSP
EQLSGGERALFNLSLRCAIYRLLSEGIEGAAPTPPLILDEPTVFLDAGHVSRLVDLVEEM
RGFGVRQILIVSHDEELVDAADELVTVEKDTTTNRSTARREDAATLAGAEALLESGDD
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcgaccgcctgcggcttcggaacttcaaaccgtacgccgacaccgacctgcag
ttcaccgacggcgtcaccgtgatccacgggctgaacgggtccgggaagtcgtcgctgctc
gaggcgtgcttcttcgcgctctacggctcacaggcgctggacggcacgctcgacgacgcc
gtcaccactggcgccgaggagaccgacgtggagctgtggttcacccacgccggcgaggag
tacaagatcacccgcgaactccgtcgctccggcggctcggtgtcgacgcggacctgtgtg
ctggagggtgccgacaccacggtcgagggggcccgcgacgtgcgggagttcgtcggcgag
gagctgctccggatggacagcgaggcgttccgcaactgcgcgtacatccggcagggcgag
gtgaaccgcctcatcaacgcctcgccgcgggagcgccgggagatgatcgacgacctgctc
cagctcggcaagctggaggagtaccgcgagcgggcccgcgacgcccgactcggcgtggag
gacgtgctcggggacaaacgcggcgggctgaacaaactcgaggagcagatcgaagccaag
gaggcgaaggagctccacgagcggctcaacgagctcgagagcgaactcgcggagctggat
tctgagatcgaacgcttcgaggggaaccgtgaggaggcccgcgagacccgcgacgaagcc
cagtcgatcgtcgacgaggccgaggaacaggagagcgaactcgaagagctgaacgaggag
atcgaggagttggaggcgtcgatccgcgagaccgagaacgaacgcgaggaactgctggac
gagatcaccgagatccgcgaacggatcgacgaacgcgaggccgaactcgacgaactcgcc
gacgccgccggggtcgacgccgcgacggaggaagccgtcgctcaggcccgcgaggaactc
gacgacagcgaagccgacctccgcgagcagcgcgaggacgcccgcgaccgcgtgagcgat
ctcgaaaacgaggtcgagagcctcgagagcgaggcagagcgactgcgcgagcgggccggc
gagaagcgcgaccgcgccgacgaactcgagagcgaggccgacgacgccgaggacgacctg
gaagacgtccgcacgaagctcgacgaggtcgccgaggagcgcgagtcgatcgcggcgcgg
ttcgccgacgcgcccgtcgagatgggcgaagccgaggaacaccgcgaacagctccgcgag
gagctcgacgaggtacaggaagcgatcgaggagaccgtcggggatctcgcctccgcccgc
gaccgcgtcgaggaggccgaggaactgctcgaacagggtaactgccccgagtgcgggcag
ccagtcgaggactctccccacgtcgacgcgctcgaggcggaccgcgagcgcgtcgaggag
ctctcggccgaactgggcgaactcaacggccggaaagccgacctgaaagaggagatcgag
acggcggaggagctggtcgacgccgagagccgcgccgagtcgctcgacgagcgccgggag
atgctcgaggagcgcaccgacggactggagagcgaggtcgagagcgaccgcgcggaggcc
gaagagctccgcgaggaggccgaggaactcgaggccgaagctaaggagaccgaaacggag
gccgaggagatggagtccgaggctgaggcggcccgcgaacgcgtggccgaactcgaggag
gaactcgacgcactcgacgagcaccgcgaccggctcgacgccgtcgaggaggcgctcgcg
gccatcgagggcgacgaggacgagatcgaccgcctgcgtgaacgccgggagagcaaggcc
gaactcgccgcggagcgccgggaccgactggacgatctgcgggagcgccgcgacgaactc
cgcgaacagttcgaccgcgaccgcgtcgagcaggcccggaaaaagcgggagagcgccgag
gagtacctcgagaaagtcgagaacaaactcgactcgttggccgaacagcgcgacgaactc
accggcgagatcggcagcgtcgagaacgagatcgaagagctcgaagcgctccgcgaggac
cgtgaggagctggcggagaccgtcgccgacctggagtcgctccacgaggagaccgaggag
ttagagcggacgtacggcgacctgcgggccgaactccgccagcgcaacgtcgagagcctc
gaacgcatgctgaacgagacgttcgacttggcgtacggcaacgacgcctactcccacatc
gagctcgacggcgagtacgaactcaccgtctaccagaaggacggcacgccgctctccccg
gagcagctctccggaggcgagcgcgcgctgttcaacctctcgctgcggtgtgcgatctac
cgcctgctctcggaggggatcgagggcgcggcgccgacgccgccgctgatcctcgacgaa
ccgacggtgttcctcgacgccggccacgtctcccggctagtggatcttgtcgaggagatg
cgcgggttcggcgtgcgacagatcctgatcgtgagccacgacgaggagctggtcgacgcc
gccgacgaactcgtgaccgtcgagaaggacacgacgacgaaccgctcgacggcgcgccgg
gaggacgccgcgacgctcgcgggcgcggaagcactgctggagagcggcgacgattag
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