Halolamina sp. CBA1230: B4589_017030
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Entry
B4589_017030 CDS
T06651
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4589_017030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haln03000
]
B4589_017030
03021 Transcription machinery [BR:
haln03021
]
B4589_017030
Transcription factors [BR:
haln03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
B4589_017030
Transcription machinery [BR:
haln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
B4589_017030
RNA polymerase III system
TFIIIB
B4589_017030
RNA polymerase I system
SL1/TIF-1B
B4589_017030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DsbC_N
GTT3_C
Motif
Other DBs
NCBI-ProteinID:
QKY22112
LinkDB
All DBs
Position
pCBA1230-02:113656..114204
Genome browser
AA seq
182 aa
AA seq
DB search
MVEIANTVGSGDVGVELDIAEVEGDLPVPYTEYDPENYHGLYVRLVENGPLITLYRSGKY
IISGCSNFEELHETNRAFLQTLAGLDIIDSSIETGFTVQNVVCTGELQRSVNLNALSIGL
GLEAVEYEPEQFPGLIYRPPDFPAVLLVFANGNVVITGAADVETAEEAFNHLQTKVERLL
DD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagatcgcgaacaccgttggctcgggcgacgtcggtgtcgaactggacattgcg
gaagtcgagggagatctcccggttccgtacactgaatacgatcccgagaactaccacggt
ctctacgtacggcttgtcgagaatgggccactcatcaccctctaccggagcggcaagtac
atcatcagcggctgttccaacttcgaggaattacacgagacaaaccgtgcgttcctgcag
accctcgccgggctggacatcatcgattcatccatcgagaccgggtttaccgtccagaac
gtcgtctgtacgggagagttgcagcgatcggtgaacctcaatgcgttgtcgatcgggctg
ggactagaagcagtcgagtacgaacccgagcagttccctggcctcatctatcggccgccg
gatttcccagccgtgctgttagtcttcgcgaatggtaacgtcgtcatcactggcgcagca
gatgtagaaactgcagaggaggcattcaatcaccttcagacgaaggtggagaggcttctc
gacgactga
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