Halolamina sp. CBA1230: B4589_017330
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Entry
B4589_017330 CDS
T06651
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
haln
Halolamina sp. CBA1230
Pathway
haln03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haln00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
B4589_017330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haln03021
]
B4589_017330
Transcription machinery [BR:
haln03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
B4589_017330
Prokaryotic type
Archaeal type
TFB
B4589_017330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
QKY22164
UniProt:
A0A7D5C7U0
LinkDB
All DBs
Position
pCBA1230-02:complement(176498..177466)
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AA seq
322 aa
AA seq
DB search
MTPPLTVTDDEQERDREPTAAPSEEATDCPECDGRITTQEDRGERLCEDCGLVLKEDSID
HGPDWRSFSNDETDRRRIGAPVTELLHDKGLSTTIGWRDKDAYGNTLSSKKRERIHRLRT
WDERFRTKSSQERNLKQALAEIERMASALGLADPPRETAAVLYRRAVEEGLLPGRSIESM
ATASLYAAARQHDMPRALAAFDSVSRVEKLEIQRAYRYLSQELGLSIEPADPVQYLRQYV
SDADVSSEVERLARDLLETGKEQGVHSGKSPPGLAGAAIYAAAQLANEQITQAIVSQAAG
VSEVTIRNRYQELLEVYGEHRA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaccactcaccgtcacggatgacgagcaggagcgcgaccgcgagcccaccgcg
gccccgagtgaggaagccactgactgcccggagtgcgacggccggatcaccacgcaagag
gatcgcggtgaacgcctctgtgaagactgtggactcgtcctcaaggaagactcgatcgac
cacggccccgactggcgatcgttttccaacgatgagaccgaccggcgccgcatcggcgca
cccgtgacggaactgctccacgacaaggggttgagcacgaccatcgggtggcgggacaag
gacgcctacgggaatacgctctcctcgaagaagcgtgagcgtatccaccgactccggacg
tgggacgaacggttccgcacgaaatcctcacaggagcgcaatctcaagcaggcgctcgcg
gagattgagcggatggcttcggccctcgggctcgccgatccaccccgtgagacggcggcg
gtgctctaccgccgcgccgtcgaggagggtctcctccccggccggtcgatcgagtcgatg
gcgacagccagcctctacgcggcggcccgacagcacgacatgccgcgggcgcttgcggcg
ttcgactcggtcagccgggtcgagaaactcgagatccagcgggcctaccgatatctctcg
caggagttgggactgtcgatcgagccggccgacccggttcaatacctccggcagtacgtc
tcggacgccgacgtgagcagcgaggtcgaacggctcgcacgggatctactcgaaaccggg
aaggaacagggcgtccacagtgggaagagcccgcccggactggcgggcgcagccatctac
gccgcggcacaattggccaatgaacagatcacacaggcgatcgtcagccaggcggccggc
gtgagcgaggtcacgatccgcaatcgctaccaagagctactggaggtgtacggtgagcac
cgtgcgtga
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