Halomonas sp. 1513: BWR19_01265
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Entry
BWR19_01265 CDS
T04761
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
halo
Halomonas sp. 1513
Pathway
halo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWR19_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halo03019
]
BWR19_01265
03016 Transfer RNA biogenesis [BR:
halo03016
]
BWR19_01265
Enzymes [BR:
halo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BWR19_01265
Messenger RNA biogenesis [BR:
halo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BWR19_01265
Transfer RNA biogenesis [BR:
halo03016
]
Prokaryotic type
tRNA degradation factors
BWR19_01265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
APX91686
LinkDB
All DBs
Position
262658..264805
Genome browser
AA seq
715 aa
AA seq
DB search
MKDATVNPVKKTFQYGRSTVTLETGRVARQATGAVQVTMDDTVVLCTVVAKKDANPAQPF
FPLGVFYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVVCT
VLSTDRNHDPDIAAMLGTSAALCISGVPFNGPIAAARVGFNDDQGYFLNPTVEELGSSEL
DMVVAGTDKAVLMVESEAKELLEDEMLGAVLFAHQEMQVAIGAINELVAEAGKPKWDWQP
PAENTALKEAVKAGFEAKIGDAYRITDKMARQDALAAAKAEAVEQLAGEEEGKFEADEVK
GAFASLEKKVVRARVTSGEPRIDGRDHKTVRPLSIEVGNLPKTHGSALFTRGETQAIVIA
TLGTLRDAQLIESLEGERKDRFLLHYNFPPYCVGETGFMGGPKRREIGHGRLARRGVQAM
LPNEDDFPYTIRVVSEITESNGSSSMASVCGTSLALMDAGVPLKAPVAGIAMGLVKDEDK
FAVLTDILGDEDHLGDMDFKVAGSAAGVTALQMDIKIEGINEEIMEQALQQAHEARLNIL
EQMNAVIDQSRSEVSENAPSMATIKIDPDKIRDVIGKGGATIRKICDDTGASIDLDDDGT
VRIYAEDKKAAKAAIDIVLGITAEAEIGKLYMGKVVRIADFGAFINIMPGTDGLVHISQI
VPERVNDVRDFLNEGDEVIVKVLDIDNRNRVKLSIKEITEEEKAAFQAEAAAIEV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggatgctaccgtgaatccggtaaagaaaacattccagtacgggcgcagcaccgtc
actctcgagacggggcgcgtcgctcgccaggccaccggcgccgtgcaggtgaccatggac
gataccgtggtgctgtgcaccgtggtagcgaagaaagacgccaaccccgcacagcctttt
ttcccgctgggcgtgttctatcaggaaaagacctacgccgtaggcaagattcccggtggc
ttcttcaagcgcgaaggccgccccaccgagaaggaaaccctcacctcgcggctgatcgac
cggccgatccgcccgctgttccccaaggggttcatgaacgaggtgcaggtggtatgtacc
gtactctccaccgatcgtaaccacgatccggacattgccgcgatgctcggcacctcggcg
gcgctgtgcatttccggtgtgccgttcaacggcccgattgccgccgcccgcgtcggcttc
aacgacgaccagggctacttcctcaaccccaccgtggaagagctgggcagctccgagctg
gacatggtcgttgcaggcaccgacaaggccgtgctgatggtcgagtccgaagccaaggag
ctgctcgaggacgagatgctgggcgcggtgctgttcgcccaccaggaaatgcaggtggcg
atcggcgccatcaacgagctggtcgcagaagcgggcaagcccaagtgggactggcagccg
ccggccgagaacaccgccctcaaggaggccgtcaaggccggcttcgaggccaagatcggc
gacgcctaccgcatcaccgacaagatggctcgccaggacgccctggccgcggccaaggcc
gaggccgtggagcagctggccggcgaggaagagggcaagttcgaggccgatgaggtcaag
ggcgcttttgccagcctcgagaagaaggtcgtgcgcgcccgtgtcaccagcggcgagccg
cgcatcgacggccgcgatcacaagaccgtgcggccgctgagcatcgaggtcggcaacctg
cccaagacccacggctcggcgctgttcacccgcggcgagacccaggcgatcgtcatcgcc
accctgggcaccctgcgcgacgcccagctgatcgagtcgctggaaggtgagcgcaaggat
cgtttcctgctgcactacaacttccctccctactgcgtcggtgagaccggcttcatgggc
ggccccaagcgtcgcgagatcggccacggtcgcctggcgcgccgcggcgtgcaggccatg
ctgcccaacgaggacgacttcccctacaccatccgcgtggtctccgagattaccgaatcc
aacggctcgagctcgatggcctcggtgtgcggcacctcgctggcgctgatggatgccggc
gtgccgctcaaggcaccggtggcgggtatcgccatggggctggtcaaggacgaggacaaa
ttcgccgtcctcaccgatatcctgggtgacgaggaccacctcggcgacatggacttcaag
gtcgcgggctccgccgccggggtcacggcgctgcagatggacatcaagatcgagggcatc
aacgaggagatcatggagcaggcgctgcagcaggcccatgaggcgcgcctcaatatcctc
gagcagatgaacgcggtgatcgaccagagccgcagtgaagtctccgagaacgctccgtcg
atggccaccatcaagatcgacccggacaagatccgcgacgtgatcggcaagggcggcgct
accatccgcaagatctgcgatgacaccggcgcctccatcgacctcgacgacgacggcacc
gtgcgcatctacgccgaggacaagaaggctgccaaggcggcgatcgatatcgtgctgggg
atcaccgccgaggccgagatcggcaagctgtacatgggcaaggtggtgcgcatcgccgac
ttcggtgccttcatcaacatcatgccgggtaccgacggcctggtgcatatctcgcagatc
gtccccgagcgggtcaacgacgtgcgcgacttcctcaacgagggcgacgaggtgatcgtc
aaggtgctcgacatcgacaaccgcaaccgcgtcaagctgtcgatcaaggagatcaccgag
gaagagaaggcagccttccaggccgaggcggccgctatcgaagtctga
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integrated database retrieval system
