Halomonas sp. 1513: BWR19_01860
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Entry
BWR19_01860 CDS
T04761
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
halo
Halomonas sp. 1513
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halo03019
]
BWR19_01860
Messenger RNA biogenesis [BR:
halo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BWR19_01860
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TraI_2
HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
APX91786
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All DBs
Position
complement(404788..405729)
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AA seq
313 aa
AA seq
DB search
MMLNDVPKTTAKPFSGTFRLTGRVVDFDQHGTPYLKIRLSNCDTDHIGGFDIEHTHFPEE
IGYLDQVVVSGDICPPNPINLDVKINNIRRASLKEAVSQPVLNSLPQVYCSAPESLEKLI
QSVRSLNSHHLQEFVRRVIERKDRMEAFLNAPASRSHHHAYPGGLLDHSLDVAKNVVAMA
QINEPEMPRTLKEVGFVAGLFHDIGKTYTYDSKGKPNAAWSLCSHDALTLEACAFGLAYL
DRHLPELAVTLRHIWTSASPGARYGHQPATTLARYVRDADGQSSMSHRQAAIFQFSGSGL
IKKGKDIFWSPAV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttaacgatgtaccaaaaaccactgcaaagcctttttctggaacctttcgcctg
acggggcgagttgtcgactttgaccagcacggcacaccatatcttaaaatccgccttagc
aactgcgacaccgaccacattggtggatttgacatcgagcacacccatttccctgaagaa
atcggatatttagaccaggttgtagtttcaggggatatctgtccacccaaccctatcaac
ctggacgtcaagatcaataacatccgaagagcatcgcttaaagaggctgtctcacagcct
gtattaaatagcctcccccaggtctattgctccgccccagagtcactggaaaaactgatc
cagtctgtgcgctcactgaactcacatcaccttcaagagtttgtcagacgagtcattgaa
cgcaaggacagaatggaggcttttctcaacgcacctgcaagtaggtcgcatcaccatgcc
tatcccggcgggttattggatcactcgctggatgtggcaaagaatgtcgtagccatggct
cagattaacgaacccgaaatgccgagaactctcaaagaagttggctttgtcgcaggtctc
tttcatgatattggaaaaacctacacctacgattccaaaggaaagcccaatgcggcttgg
agtttgtgcagtcatgatgcactgacgctggaagcctgcgcctttggcttggcttacctt
gatagacatttaccggagttggcagttaccctgaggcacatatggactagcgcttcaccg
ggggcgcgttacgggcatcagcctgcaacaacattggcaaggtatgtgagggatgctgat
ggacaaagttcgatgtcacatcgtcaagctgctatatttcaattttccgggagtggacta
ataaaaaaaggaaaggatatattttggtcgccagcagtgtga
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