Halomonas sp. 1513: BWR19_02300
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Entry
BWR19_02300 CDS
T04761
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
halo
Halomonas sp. 1513
Pathway
halo03030
DNA replication
halo03430
Mismatch repair
halo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BWR19_02300
03430 Mismatch repair
BWR19_02300
03440 Homologous recombination
BWR19_02300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halo03032
]
BWR19_02300
03400 DNA repair and recombination proteins [BR:
halo03400
]
BWR19_02300
Enzymes [BR:
halo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BWR19_02300
DNA replication proteins [BR:
halo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BWR19_02300
DNA repair and recombination proteins [BR:
halo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BWR19_02300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Herpes_IR6
Motif
Other DBs
NCBI-ProteinID:
APX91869
LinkDB
All DBs
Position
495880..499380
Genome browser
AA seq
1166 aa
AA seq
DB search
MTTPFVHLRVHTEYSLVDGLVRLKPLVKATAERGMPAVSITDEANLFGLVKAYKAAQGAG
LKPIIGSDLWLHNPHDEGHPYRLTLLAMNDVGYRNLTELISRGWTDGQRQGLAILDKAWV
FEQSEGLIVLSGAREGEIGRHLLADHPDEARALLDEWNARFPGRFYLELTRTSRQYEEEC
LHLSVALAEQSGTPVVATNDVRFLEREEFWAHETRVAIGEGKALDDRRRERRYSEEQYLK
SPAEMAELFADIPEALENSVLIAARCNVDVRLGEIFLPEFEIPEGMTQDEFFRKISHDGL
TERLDFLYPAERYPRDGAEYAEIDQRYRERLDFELNIIIQMGFPGYFLIVMDFIQWAKDN
DVPVGPGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEKRDRV
IDYVAERYGRNAVSQIVTFGTMAAKAVVRDVARAQGRPYSLGDKLSKLIPFEVGMTLAKA
IEAEPALKEFVDNDDEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSPLLCDEEG
NGLVVQFDKNDIEEAGLVKFDFLGLRTLTIIDWALEMVDKVRAVKGEGPLDIDTIPLDDA
PTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINR
KHGRAEISYPHPDYQHEWLKTVLEPTYGIILYQEQVMQIAQVLAGYSLGQADMLRRAMGK
KKPEEMAKQRAGFMEGCAANGIDKELAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWL
KSHYPGPFMAAVISTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTEGRVVYG
LGAIRGVGEGPIGAIVEAREADGPFKDLFDFCRRVDPKRMNKRTLEALIRSGALDNLGPN
RAVLSAALEAALKAAAQNLSNQNLGMIDMFGEAFVDEEVGDVYADYRDAREWTDKERLAG
EKDTLGLYLTGHPIDEYEQELKRFVSTRISDLKPSREPQRVAGLVVGMRTMKSKRGDTMA
FVTLDDRTGRIEASLFGELFDQLRGRLDADQVLIVEGEVSSDDYSGGLRLRGKEITPMVE
ARSKFGQAVEVSLDGARANGRMVASLRDSLTPHRDASGLPVRLKYRNQDASGWLELAEEW
KVAPSDELLIALREVEGQDGVRLKYR
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcccttcgttcatcttcgcgttcacaccgagtactccctggtcgatggcctg
gtgcgcctcaagccgctggtcaaggccaccgccgagcgcggcatgccggccgtgtcgatc
accgacgaagccaacctgtttggcctggtcaaggcctacaaggcggcccagggcgccggc
ctcaagccgatcatcggcagcgacctgtggctgcacaacccccacgacgaaggccacccc
taccggctgacgctgctggccatgaacgacgtgggctaccgcaaccttaccgaactgatc
tcccgcggctggaccgacggccagcgccaggggctggcgattctcgacaaggcctgggta
ttcgaacagagcgaggggctgatcgtgctctccggcgcccgcgagggcgagatcggccgc
cacctgctggccgaccaccccgacgaggcccgcgcgctgctcgacgagtggaacgcccgc
tttccggggcgcttctacctcgagctgacccgcacctcgcgccagtacgaggaggagtgc
ctgcacctctcggtggccctggccgagcagagcggcaccccggtggtggccaccaacgac
gtgcgcttcctcgagcgcgaagagttctgggcccacgagacccgggtcgccatcggcgag
ggcaaggcgctcgacgatcgccgccgcgagcgccgctacagcgaggagcagtacctcaag
agcccggcggagatggccgaactgttcgccgacattcccgaagcgctggagaacagcgtg
ctgattgcggcgcgctgcaacgtcgacgtacgcctgggcgagatattcctgccggagttc
gagatccccgagggcatgacccaggacgagttcttccgcaagatctcccacgacggcctc
accgagcgcctcgacttcctctacccggctgagcgctacccgcgcgacggcgccgagtat
gccgagatcgaccagcgctatcgcgagcgactcgatttcgagctgaacatcatcatccag
atgggcttccccggctacttcctgatcgtgatggacttcatccagtgggccaaggacaac
gacgtgccggtggggccggggcgcggctcgggggcgggctcactggtggcctacgcgcag
aagatcaccgacctcgacccgctggagtacgacctgctgttcgagcgcttcctcaacccc
gagcgtgtctcgatgcccgacttcgacgtcgacttctgcatggagaagcgcgaccgggtg
atcgactatgtggccgagcgctacggtcgcaacgccgtgtcgcagatcgtcaccttcggc
accatggccgccaaggcggtggtgcgcgacgtggcgcgtgcccaggggcggccctactcg
ctgggcgacaagctctccaagctgatccccttcgaggtcggcatgaccctggccaaggcc
atcgaggccgagccggcgctcaaggagttcgtcgacaacgacgacgaggccgccgagatc
tgggagatggcgctcaagctcgagggcatcacccgcggtaccggcaagcacgccggcggg
gtggtgatcgcccctaccaagctcaccgacttctcgccgctgctgtgcgacgaggagggc
aatggcctggtggtgcagttcgacaaaaacgacatcgaggaggccgggctggtcaagttc
gacttcctcggcctgcgcaccctgaccattatcgactgggcgctggagatggtcgacaag
gtacgcgccgtcaagggcgaaggcccgctcgacatcgacaccatccccctcgacgatgcg
ccgaccttcgaaatgctcaagcgcgccgagaccaccgcggtgttccagctcgaatcccgc
ggcatgaaggagctgatcaagcgcctgctgcccgattcgctggaggacatgatcgccctg
gtcgcgctgttccgcccggggccgctgcagtcgggcatggtcgacgacttcatcaaccgt
aagcacggccgcgccgagatctcctacccgcacccggactaccagcacgagtggctgaaa
acggtgctcgagcccacctacggcatcatcctctaccaggagcaggtgatgcagatcgcc
caggtgctggcgggatatagcctgggccaggccgatatgctgcgccgcgccatgggcaag
aagaagcccgaggagatggccaagcagcgcgccggcttcatggagggctgtgccgccaac
ggtatcgacaaggagctggccggcaatatcttcgacctggtggagaagttcgccggctac
ggcttcaacaagtcgcactcggcggcctacggtctggtctcctatcagacggcctggttg
aaatcacactatcccgggcccttcatggccgcggtgatatccaccgagatggataatctc
gacaaggtggtgccgctgatcgaggagtgccgcaacctcaagctcaccgtgaccccgccg
gacgtcaacgtcggcggctacaagttcaccgtggataccgagggtcgggtggtctacggc
ctgggggcgatccgcggcgttggtgaggggccgatcggcgccatcgtcgaggcccgcgag
gccgacggacccttcaaggacctgttcgacttctgccgccgggtcgaccccaagcgcatg
aacaagcgcaccctcgaggcgctgatccgctccggggcgctggacaacctgggccccaat
cgcgccgtgctgagcgcagccctggaggcggcgctcaaggccgccgcccagaacctcagc
aaccagaacctgggcatgatcgacatgttcggcgaggccttcgtcgacgaggaggtcggt
gacgtctatgccgactatcgcgatgctcgggaatggaccgacaaggagcgcctggccggc
gagaaggacaccctggggctgtacctcaccggccaccccatcgacgagtacgagcaggag
ctcaagcgcttcgtctcgacgcgtatcagcgacctcaagccgtcgcgggagccgcagcgc
gtcgccgggctggtggtggggatgcgcaccatgaagtccaagcgcggcgacaccatggcc
ttcgtcaccctcgacgaccgtaccgggcgcatcgaggcctcgctgttcggcgagctgttt
gaccagctgcgcggtcgcctcgacgccgaccaggtgctgatcgtcgagggtgaggtgtcg
agcgacgactactccggcggcttgcgcctgcgcggcaaggagatcacgccgatggtcgag
gcgcgcagcaagttcggccaggcggtggaagtctcgctggacggcgcccgcgccaacggc
cgcatggtggccagcctgcgcgacagcctcaccccgcaccgcgatgccagcggcctgccg
gtgcggctcaagtaccgcaaccaggacgccagcggctggctggaactggccgaggagtgg
aaggtggcgcccagcgacgagctgctgatcgccctgcgcgaggtcgaggggcaggacggt
gtgcgcttgaaataccgctag
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integrated database retrieval system
