Halomonas sp. 1513: BWR19_05310
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Entry
BWR19_05310 CDS
T04761
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
halo
Halomonas sp. 1513
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halo03016
]
BWR19_05310
Enzymes [BR:
halo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BWR19_05310
Transfer RNA biogenesis [BR:
halo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BWR19_05310
Prokaryotic type
BWR19_05310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APX92403
LinkDB
All DBs
Position
1151001..1152047
Genome browser
AA seq
348 aa
AA seq
DB search
MSESWPPAWPRVLDAEFGAPVPGEYRAAPEDFVVEECLDFTPEGQGEHLWLWVEKRDLST
LEVARRLARACEVTQRDIGYAGMKDRVAVTRQWLSVHLPGREAPADLAERLADTPLVLLE
QQRHPRKLKRGVHRANRFTLRLSGAVVDDPRLEARWRRLIDAGVPNYFGPQRFGPAGRNL
SKARAILAKGWRKRDDREGMLLSTARSYLFNQLLARRIAAGDWATPVDGELLVLDGSASQ
FASARVDAELLERAARLDVHPSGALWGTGDAATSAAALAHEQAVIAAEPALAEGLVRAGV
RMARRPLRVRLGEPSLERHAGALTLRFALPRGAFATAALRELIEHPSL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcctggccgccggcctggccgcgagtgctcgacgccgagttcggcgcgcct
gtgcccggcgagtatcgtgcagcgccggaagatttcgtggtcgaggagtgcctcgatttc
acccccgaaggccagggtgagcacctctggctgtgggtcgagaagcgagacctcagtaca
ctggaggtggcgcgtcggctggcgcgggcctgcgaggtcacgcagcgcgacatcggctat
gccgggatgaaggatcgcgtggcggtgacccgccagtggctgtcggtgcacctgcctggg
cgagaggcgcccgccgacctcgccgagcgcctggccgacactccgctggtgctgctcgag
cagcagcgccacccgcgcaagctcaagcgcggagtgcaccgtgccaaccgcttcaccttg
cgcctgagcggcgcggtggtcgacgacccgcggctcgaggcgcgctggcggcggctgatc
gacgccggcgtgcccaactattttggcccccagcgcttcggcccggcgggccgcaacctg
tccaaggcgcgggcgatcctggccaagggctggcgcaagcgcgacgaccgtgagggcatg
ctgctctccaccgcacgcagctatctgttcaaccagctgctggcgcggcgtatcgccgcc
ggtgactgggccacgccggtggacggcgagctgctggtgctcgacggcagcgccagccag
tttgccagcgccagggtagacgccgagctgctcgagcgcgccgcgcgtctcgacgtgcat
cccagcggggcgctgtggggcaccggtgatgcggcgaccagcgccgcggcactggcacat
gagcaggcggtgatcgccgccgagccggcgctggccgaggggctggtgcgtgccggggtg
cgcatggcgcggcggccgctgcgcgtgcggctcggcgaacccagcctcgagcgccatgca
ggcgcgctgacgctgcgttttgcgctgccgcggggcgccttcgccaccgcggcactacgc
gagctgatcgagcatccgagcctatga
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