Halomonas sp. 1513: BWR19_05675
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Entry
BWR19_05675 CDS
T04761
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
halo
Halomonas sp. 1513
Pathway
halo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWR19_05675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halo03019
]
BWR19_05675
Messenger RNA biogenesis [BR:
halo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BWR19_05675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
APX92471
LinkDB
All DBs
Position
1233940..1234431
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AA seq
163 aa
AA seq
DB search
MIDADGFRPNVGIIIANREGQLLWARRVGQNAWQFPQGGIKSDETPQQALYRELEEEIGL
TSADVDVLACTRGWLRYRLPRRMIRTHSRPVCIGQKQKWFLLQIRCQDSQICVDTTPKPE
FDGWRWVSYWYPLGQVVPFKREVYRRALRELAPRAQRLALGDD
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgctgacggcttccgccccaacgttggcatcatcattgccaaccgcgagggc
cagctgctttgggcgcgtcgggtaggacagaatgcgtggcagtttccccagggaggcatc
aagtctgacgagacaccacagcaggcgctgtatcgcgagctggaagaagagatcggcttg
acgtctgccgatgtcgacgtgctggcctgtacccgggggtggctgcgctatcgtctgcca
cgacgcatgataagaacgcattcgcggccggtatgcatcggccaaaagcagaagtggttt
ttgctgcagatacgctgtcaggatagccagatctgtgtggatacgacccccaagccggag
ttcgatggctggcgctgggttagctactggtatccactggggcaggtggtgcccttcaag
cgggaggtctatcgccgcgcgctgcgcgagctggctcctcgcgcgcagcggctggcgctg
ggtgacgactga
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