Halomonas sp. 1513: BWR19_07760
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Entry
BWR19_07760 CDS
T04761
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
halo
Halomonas sp. 1513
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
halo03032
]
BWR19_07760
03400 DNA repair and recombination proteins [BR:
halo03400
]
BWR19_07760
Enzymes [BR:
halo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BWR19_07760
DNA replication proteins [BR:
halo03032
]
Prokaryotic type
DNA Topoisomerases
BWR19_07760
DNA repair and recombination proteins [BR:
halo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BWR19_07760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
APX92831
LinkDB
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Position
1705146..1707782
Genome browser
AA seq
878 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSVGHIRDLPTSGSGKTASDPKERARQAAATR
KMSPDEKAVYKKQKSWDQLIRRMGIDPEHGWEAHYEVLPGKEKVVADLQKHAEKADAVYL
ATDLDREGEAIAWHLQETIGGEPSRYKRVVFNEITKNAIQEAFKEPGSLNIERVEAQQAR
RFLDRVVGFMLSPLLWAKVARGLSAGRVQSVAVRLIVEREREIRAFVPEEFWDVHADLAV
ADDAKAEPIRFELVRQDGKAFRPTSEAETLERIAALRKASLEITAREDKPTRSKPNAPFI
TSTLQQAASGRLGYSVKKTMTMAQRLYEAGYITYMRTDSTNLSKDAVDSVREHIEQAYGK
RYLPEAPNRYSSKEGAQEAHEAIRPSDVSLKATDLSGMERDAERLYELIWRQFVACQMTP
AEYLSSTLTVEVDGYELRAKGRVLKFDGYTRVMKPSGKNEDQSLPDLAEGTAMTLEQLDP
QQHFTKPPARFTEASLVKELEKRGIGRPSTYASIISTIQDRGYVKLESRRFYAEKLGDIV
TERLKESFPDLMDFSFTARMEDGLDEVAEGERNWQALLDAFYAEFKKELEAAESEDGMRP
NQPVPTGIDCPSCGRKMQIRTASTGVFLGCSGYNLPPKERCKTTIDLIPGEEAVAADAGE
EAETEALRAKHRCPKCGTAMDSYLIDETRKLHICGNSPDCDGHEVEQGRFKLKGYEGPVI
ECDKCGSEMQLKSGRFGKYFGCTNSECKNTRKLLKSGEVAPPKIDPIPMPELACQKVDDH
YVLRDGASGLFLAASQFPKNRETRPPLVKELKAHAEELPEKYHFLLEAPSEDPDGRPAQI
RFSRKTKSQFVMTDEDGKATGWKALYENGKWQVEDKRK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcactggtcatcgtcgagtcgccggccaaggccaagacgatcaataaatac
ctcggcaacgatttcatcgtgaagtcgagtgtaggtcatattcgtgacctgccgaccagc
ggctcgggcaagacggcctctgatcccaaggagcgcgctcgccaggccgcggcgacgcgc
aagatgtcgccggacgagaaggcggtgtacaagaagcagaagtcgtgggaccaactgatt
cggcgcatgggcatcgaccccgagcacggctgggaagcccactacgaggtgctgccgggc
aaggagaaggtggttgccgacctgcagaagcacgccgagaaggccgacgccgtctacctg
gcgacggatttggaccgcgagggggaggcgatcgcctggcaccttcaggagaccatcggc
ggcgaaccgtcgcgctacaagcgggtggtgttcaacgagatcaccaagaacgccatccag
gaggccttcaaggagcctggcagcctcaatatcgagcgcgtcgaggctcagcaggcgcgg
cgcttcctcgaccgcgtggtgggcttcatgctctcgccgctgctgtgggccaaggtcgcc
cgcgggctctccgccggccgcgtgcagtcggtggcggtgcgcctgatcgtcgagcgcgag
cgtgagatccgcgccttcgtgcccgaagagttctgggacgtgcatgccgacctggcggtg
gccgacgacgccaaggccgagccgatccgcttcgagctggtgcgccaggacggcaaggcc
ttccggcccacctccgaggccgagaccctcgagcgcatcgccgcactgcgcaaggcgagc
ctcgagatcaccgcgcgtgaggacaagccgacccgctccaagcccaatgcccccttcatc
acctcgaccctgcagcaggccgccagtggccggctggggtactcggtgaagaagaccatg
accatggcccagcggctctacgaggcgggctacatcacctacatgcgtaccgactccacc
aatctctccaaggatgcggtggatagcgtgcgcgagcatatcgagcaggcctacggcaag
cgctacctgcccgaggcgcccaatcgctactccagcaaggagggcgcccaggaggcccac
gaggcgatccgcccctccgacgtcagcctcaaggccaccgacctgtcgggcatggagcgt
gacgccgagcggctctatgagttgatctggcgccagttcgtggcctgtcagatgaccccg
gcggagtatctctccagcaccctgacggtggaagtcgacggctatgagctgcgcgccaag
ggccgggtgctcaagttcgacggctatacccgggtaatgaagccgtcgggcaagaacgag
gaccagtcgctgcccgacctcgccgagggcaccgccatgaccctcgagcagctcgacccg
cagcagcacttcaccaagccgccggcgcgctttaccgaggcgagcctggtcaaggagctg
gagaagcgcggcatcggccggccctcgacctacgcctcgatcatctcgaccatccaggac
cgcggctacgtcaagctcgagagccggcgcttctacgccgagaagctcggcgatatcgtc
accgagcggctcaaggagtcgttccccgacctgatggacttctcgttcacggcgcgcatg
gaggacggcctcgatgaggtcgccgagggcgagcgcaactggcaggcgctgctcgacgct
ttctacgccgagttcaagaaggagctggaggccgccgagagcgaagacggcatgcgcccc
aaccagccggtgccgaccggcatcgactgcccgagctgcgggcgcaagatgcagatccgt
accgcctccaccggcgtgttcctgggctgctcgggctacaacctgccgcccaaggagcgc
tgcaagaccaccatcgacctgatccccggcgaggaggcggtggccgccgacgccggcgaa
gaggccgagaccgaggcgctgcgcgccaagcaccgctgccccaagtgcggcacggcgatg
gacagctacctgatcgacgagacccgcaagctgcatatctgcggcaacagtcccgactgc
gacggccacgaggtggagcaggggcgcttcaagctcaagggctacgaaggcccggtcatc
gagtgcgacaagtgcggcagcgagatgcagctcaagagtgggcgtttcggcaagtacttc
ggctgcaccaacagcgagtgcaagaacacccgcaagctgctcaagagcggcgaagtggca
ccgcccaagatcgacccgatcccgatgcccgagctggcctgtcagaaggtcgacgaccac
tacgtgctgcgcgacggcgccagcggcctgttcctggccgccagccagttccccaagaac
cgcgagacccgcccgccgctggtcaaagagctcaaggcccacgccgaggagctgcccgag
aagtatcacttcctgctcgaggcgcccagcgaggacccggacggccgcccggcgcagatc
cgcttctcgcgcaagaccaagagtcagttcgtgatgaccgacgaggacggcaaggccacc
ggctggaaggcgctctacgagaacggcaagtggcaggtggaggacaagcgcaaatga
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