Halomonas sp. 1513: BWR19_08785
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Entry
BWR19_08785 CDS
T04761
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
halo
Halomonas sp. 1513
Pathway
halo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWR19_08785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halo03019
]
BWR19_08785
Enzymes [BR:
halo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BWR19_08785
Messenger RNA biogenesis [BR:
halo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWR19_08785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
HI1480
AAA_22
DUF2529
Motif
Other DBs
NCBI-ProteinID:
APX93014
LinkDB
All DBs
Position
complement(1970817..1972133)
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AA seq
438 aa
AA seq
DB search
MSFSDLGLRAELLRAVDEQGYTTPTPIQLKAIPAVLQGGDLLASAQTGTGKTAGFTLPLL
QRLADGPRPKPRQIRALVLTPTRELAAQIGENVTGYGRYLKLRSHVIFGGVGQQPQVDAI
RGGLDILVATPGRLLDLHQQKHIDLSQVETLVLDEADRMLDMGFIHDIKKILRVLPQKRQ
NLLFSATFSDEIQRLAGGLLDNPTMIEVARRNTTAELVDQAVYKVDREKKRELLAHLIST
QKWYQVLVFTRTKHGANRLAEQLSKQDIPAMAIHGNKSQSARTKALASFKAGDLQVLVAT
DIAARGLDISELPHVVNFELPNVAEDYVHRIGRTGRAGSEGKAVSLVCVDEHGLLKGIER
LIKRDLEKHIEPGFEPDPNAKPEPIENGRRGQQKRSGGGGRGNAGGQRASGNRSDQPRRS
SDDARAPRRRRGGRSKQA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttccgacctcggcctgcgggccgaactgctgcgcgctgtcgacgaacagggc
tataccacccctaccccgatccagctaaaggcgatccctgcggtactccagggtggcgac
cttctcgccagcgcccagaccggtaccggcaagaccgccggcttcaccctgccgctgctg
cagcgcctggccgacggcccgcgccccaagccgcgccagatccgcgccctggtgctgacc
ccgacccgtgagctggccgcacagatcggcgagaacgttaccggttacggccgctacctc
aagctgcgctcgcacgtgatcttcggcggcgtcggccagcagccccaggtcgacgccatt
cgcggcggcctggatatcctggtggccacccccggccgactgctcgacctgcaccagcag
aagcacatcgacctctcccaggtcgagaccctggtgctcgacgaagccgaccgcatgctc
gatatgggcttcatccacgacatcaagaagatcctgcgcgtgctgccgcagaagcgccag
aacctgctgttctcggcgaccttctccgacgaaatccagcgcctggccggcggtctgctc
gacaaccccaccatgatcgaggtggcgcgccgcaacaccaccgccgagctggtcgaccaa
gccgtctacaaggtcgatcgcgagaagaagcgtgagcttctggcgcacctgatcagcacg
caaaagtggtaccaggtactggtcttcacgcgcaccaagcacggcgccaaccgcctggcc
gagcagctctccaagcaggacattccggccatggcgatccatggcaacaagagccagtcg
gcgcgcaccaaggcgctggcctcgttcaaggcgggtgacctgcaggtgctggtcgccacc
gatatcgccgcccgcggcctggacatcagcgagctgccccacgtggtcaacttcgagctg
cccaatgtcgccgaggactacgtgcaccgtatcggccgtaccggccgtgccggcagtgaa
ggcaaggcggtatcgctggtgtgtgtcgacgagcacggcctgctcaagggcatcgagcgg
ctgatcaagcgcgatctcgagaagcacattgagcccggcttcgaacccgatcccaacgcc
aagcccgagccgatcgagaacggtcgtcgcggccagcagaagcgcagcggcggcggtggc
cgaggcaacgccggcggccagcgtgccagcggcaaccgcagcgaccagccgcgccgcagt
agcgacgacgcccgcgcaccgcgccggcgccgcggtggccgctccaagcaggcctga
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