Halomonas sp. 1513: BWR19_11925
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Entry
BWR19_11925 CDS
T04761
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halo
Halomonas sp. 1513
Pathway
halo03420
Nucleotide excision repair
halo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BWR19_11925
03430 Mismatch repair
BWR19_11925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halo03400
]
BWR19_11925
Enzymes [BR:
halo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWR19_11925
DNA repair and recombination proteins [BR:
halo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BWR19_11925
MMR (mismatch excision repair)
Other MMR factors
BWR19_11925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
Motif
Other DBs
NCBI-ProteinID:
APX93583
LinkDB
All DBs
Position
complement(2640441..2642660)
Genome browser
AA seq
739 aa
AA seq
DB search
MKLTDEQRAVVAHAGGHARVAAVAGAGKTTTMVARVLNLLARGTPPSRLLVLMFNRAARE
DFTAKLARWAPPGQALPDVRTFHSIGHRLTGTLTRWGVLAPRELLAQEWQRERLLRQAVQ
HSLHGDEVQLESALDGDRLEAFGHFCELVKAEMEAPQALYERLDFGDDTGHFVDAFDAAE
ALLEQHRLMTYADLLYRPLRALEADAALRQRVEGFLDHVIIDEYQDINEAQQRLLALLAG
ERAAVMAVGDANQCIYEWRGAHPDTMLEDFTRTFGAAHDYPLSTTFRHGDALALAANHAI
AANRRRPDQLCLAAADNPRTRLSVAQGGSALVEALDAWQRDGRALSDGCVLVRSWALSVS
VQLQLLRAGLPFRLAREDRFVFRLPLVQALAGYLRLARQPALLQDPAHLLLLLAQPTPFV
ARERLQALATRLAESQQWPSRDDPLLASLKPIQRRNLKRRWALLCDLPKLAAWPPSRLLA
EVVERLDAEKVLKRAAARREKGEEDVRLLDVLIEQAAELDHDPEAFIALLERPVQDEAMG
AGDAEGILISTVHGAKGLEWPLVALWGVNEEDFPHYSRDNPLTPERLEEERRLFYVAMTR
AREQLLMVHDGGEHRPSRFIAESAWDDCQRVADALGAADPPQAPLPVASPALVERYLTAS
GRTLDVSAAASGVASPPGHYAAAAFDVGQRVRHAVFGEGEIQVVEGDPANPVIEVRFTHA
GKRRLIALRAPLEPLGESA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcaccgacgagcagcgcgcggtggtcgcccacgccggcggccacgcccgggtc
gccgcggtggccggggccggcaagaccaccaccatggtggcgcgggtgctgaacctgctg
gcccggggcacaccgccgtcgcgactgctggtactgatgttcaaccgcgccgcgcgggag
gatttcaccgccaagctggcgcgctgggcgccacccggccaggcgctgcccgacgtgcgt
accttccactccatcggccatcgcctgaccggcaccctgacccgctggggggtgctggcg
ccgcgtgagctgctggcccaggagtggcagcgcgagcggctgctgcgccaggccgtgcag
cacagcctgcacggcgacgaggtgcagctcgagtcggcgctggacggcgaccggctcgag
gccttcggccacttctgcgagctggtcaaggccgagatggaggcgccccaggcgctctac
gagcgcctcgacttcggtgacgacaccggccacttcgtcgatgccttcgacgccgccgag
gcgctgctcgagcagcaccgtctgatgacctacgccgatctgctgtatcggccgctgcgg
gcgctggaggccgatgccgcactacgccagcgggtcgagggctttctcgatcatgtcatc
atcgacgagtatcaggatatcaacgaggcccagcagcggctgctggcgctgctggccggc
gagcgggccgcggtgatggcggtgggtgatgccaatcagtgcatctacgagtggcgcggc
gcgcatcccgataccatgctcgaggactttacccgcaccttcggcgccgcccacgactat
ccgctgtcgaccaccttccgccacggtgatgcgctggcgctggcggccaaccatgccatc
gccgccaatcggcggcgtcccgaccagctgtgcctggcggcggcggacaaccccaggacc
cgcctgagcgtggcccagggcggcagtgcgctggtcgaggcactcgatgcctggcagcgt
gacggccgggccctcagcgacggctgcgtgctggtgcgcagctgggcgctgtcggtgtcg
gtacagctgcagctgctgcgcgccgggctgccgtttcgcctggcccgcgaggaccgtttc
gtgttccggctgccgctggtgcaggcgctggccggctacctgcgcctggcgcgtcagccg
gcgctgctccaggatcccgcgcatctgctgctgctgctcgcccagccgacgcccttcgtg
gcccgcgagcggctgcaggcgctggccacgcggctcgccgagtcgcagcagtggccgagc
cgcgacgatccgctgctggccagcctcaagccgatccagcggcgcaacctcaagcgccgc
tgggcgctgctctgcgacctgcccaagttggccgcctggccgccgtcgcggctgctggcc
gaggtggtcgagcgcctcgatgccgagaaggtactcaagcgcgccgcggcgcggcgcgag
aagggcgaggaggacgtgcgcctgctcgacgtgctgatcgaacaggccgccgagctcgac
catgacccggaggccttcattgccctgctcgagcggccggttcaggatgaggcgatgggc
gccggcgacgccgagggcatcctgatctccaccgtgcacggcgccaagggcctggagtgg
ccgctggtggcactgtggggcgtcaacgaagaggatttcccccactacagccgtgacaac
ccgctgaccccggagcgcctggaagaggagcgacggctgttctacgtcgccatgacgcgc
gcccgggagcagctgctgatggtccacgacggcggcgagcaccggcccagccgcttcatc
gccgagagtgcctgggatgactgccagcgggtggcggatgcgctgggcgccgccgacccg
ccccaggcgccgttgccggtcgcctcgccggcgctggtggagcgctacctgaccgccagc
ggccgaacgctggacgtcagcgccgccgccagcggcgtcgccagcccgccgggccactac
gcggcggcggccttcgatgtcggtcagcgcgtacgccatgcggtgttcggcgagggcgag
attcaggtggtcgagggcgacccggccaatccggtcatcgaagtgcgcttcacccacgcc
ggcaagcgccgcctgatcgccctgcgcgcgcccctggaaccgcttggagaatccgcatga
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integrated database retrieval system
