Halomonas sp. 1513: BWR19_15265
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Entry
BWR19_15265 CDS
T04761
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
halo
Halomonas sp. 1513
Pathway
halo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BWR19_15265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halo03400
]
BWR19_15265
Enzymes [BR:
halo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BWR19_15265
DNA repair and recombination proteins [BR:
halo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BWR19_15265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
APX94189
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All DBs
Position
3366490..3370134
Genome browser
AA seq
1214 aa
AA seq
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MPLALSASLHPGFMVVHGNRLEDLRGLAVEWMKRHPLSPLEYETILVQSNGIGQWMKLAL
AADEADGGSGIAAALDVTLPARFLWQAYRAVLNHVEGDPNAVPATSPFDKSHLIWRLLRL
LPELMPREEFAPLRRFLEGDNDLRKHHQLAERLADLFDQYQVYRADWLDAWGRGEDVLIS
ARGQAQALPDTQRWQPALWRALIEDVGDDGVASSRAMVHRRFLEAARQLDGDNRPVGLPR
RVMVFGISSLPQQSLEALAAIARCSQVVLCVHNPCQHYWADIIEHKDLLRAQRYRQQRKE
GMPARLDVLGDGDGEESLHLHAQPLLAAWGKQGRDYLRLLDEYDDAQQYQRLFAADSLRI
DLFEPFVGEGDGRLLQQLQDDIRELRPLHETRETWPAVDPSRDDSIVFHAAHSPQREVEI
LHDQLLAAFSDDPSLKPRDVIVMVPDIDHYAPHVQAVFGQYARGQLDRDDPRYIPFTLSD
QGSRHRLPLLIALEKLLRLPELRLSVSDLLDMIDVPALRARFGIKEDEVPTLRRWIEGAG
IRWGLNAGQRGSLDLPHGMEQNTWAFGLRRLLLGYAVGEAASGPWQGIEPFDDIGGLEAA
LAGPLAALLETLEQQWRSLREPTDVSGWVQRLRALLEASFLADTPEDSLMLAQLEQTLQE
WQESAEEAGLTRDLPLSVVREHWLGQIDESSLSQRFMAGAVNFATLMPMRAIPFKRVCLL
GMNDGDYPRSQPPMDFDLMNGDYRPGDRSRREDDRYLFLEALLSAREQLYVSWVGRSIVD
NAEKPPSVLVGQLRDHLQAGWNTTDGADLLDSLTTAHPLQPFSRTYFPSEAQQAERNVSA
RRLFTYAHEWRDIHGQAHGEAMAEAAPLDLEAYKQDTPLTLHQLGNFLRDPAKAFFTTRL
KVFLEREDIVSLDHEPFALDGLGNWQLQDLLIREQRRAVDENQPREPAMLATLDRLQGQG
VLAMGAFGERMREQLTEPMPELFDAYEAALDEWPHAIEEPEPVQLNVPGAPPLEDWLDEL
RRDPEGNRCRLVLVSSSLIKKGKYHWQHILRHWVAHLAGHLEGQAMTTRLLSKAGHVTLL
PLDQELARGHLREIVKAWQAGMREPLPLACDTAFVWLSKLGTPESERDSDAWHAARKAYE
GDDYNAGEVGRNAYLAHRWPTFTRLYEARQDALCFAELTEWLLAPVHLAVKGDKKESGKK
TGGKKEVKATGSQA
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgctttatctgccagccttcaccccggcttcatggtcgttcacggcaatcgc
ctggaggacctgcgcggcctggcggtggagtggatgaagcgccacccgctcagccccctc
gagtacgagacgatcctggtgcagagcaacggcatcggccagtggatgaagctggcgctg
gccgccgacgaggccgacggcggtagcggcatcgccgccgcgctggatgtcaccctgccg
gcgcgcttcctgtggcaggcctaccgcgcggtactcaaccacgtggaaggcgaccccaac
gcggtgccggccacctcgcccttcgacaaatcgcacctgatctggcggctgctgcgcctg
ctgccggagctgatgccgcgcgaggaattcgccccgctacgccgcttcctcgaaggcgac
aacgacctgcgcaagcaccaccagctcgccgagcgcctggccgacctgttcgaccagtac
caggtctaccgcgccgactggctcgacgcctggggccgcggcgaggacgtgctgatctcc
gcccgcggccaggcccaggcgcttcccgacacccagcgctggcagcccgccctgtggcgg
gcgctgatcgaggacgtgggcgacgacggcgtggcctccagccgcgccatggtgcaccgg
cgcttcctcgaggcggcgcgccagctcgacggcgacaaccgccccgttggtcttccaagg
cgggtgatggtgttcggcatctcatcgctgccccagcagtcgctggaagcgctggccgcc
atcgcccgctgcagccaggtggtgctgtgcgtgcacaacccctgccagcactactgggcc
gacatcatcgagcacaaggacctgctccgtgcacagcgctaccggcagcagcgcaaggag
ggcatgccggcgcggctcgacgtgctcggcgatggtgacggcgaggagagcctgcacctg
cacgcccagccgctgctggccgcctggggcaagcagggccgcgactacctgcgcctgctc
gacgagtacgacgacgcccagcagtaccagcgcctgttcgccgccgattcgctgcgcatc
gacctgttcgaacccttcgtgggcgagggtgacggccggctgctgcagcagttgcaggac
gacatccgcgagctgcgcccgctgcacgagacccgcgagacctggccggcagtggacccc
agccgcgacgactccatcgtcttccacgccgcccacagcccccagcgcgaggtggagatc
cttcacgaccagctgctcgccgccttcagcgacgaccccagcctcaagccccgcgacgtg
atcgtgatggtgccggacatcgaccactacgcgccccacgtgcaggcggtcttcggtcaa
tatgcgaggggccagctggaccgcgacgacccgcgctacatccccttcacgctctccgac
cagggcagccgccaccgcctgccgctgctgatcgcgctggagaaactgctgcgcctgccg
gagctgcgcctctcggtgagcgacctgctcgacatgatcgacgtgcccgccctgcgcgca
cgcttcggcatcaaggaagacgaagtacccaccctgcgccgctggatcgaaggcgccggc
atccgctgggggctcaacgccggccagcgcggcagcctcgacctgccacatggcatggag
cagaacacctgggccttcggcctgcgccggctgctgctgggctacgccgtgggcgaggcc
gccagcggcccgtggcagggtatcgagcccttcgacgacatcggcggcctggaggcggcg
ctggccgggcccctcgccgcgctgctggagaccctggaacagcagtggcgcagcctgcgt
gagcccaccgacgtgagcggctgggtgcagcgcctgcgtgccctgctggaagcgagcttc
ctcgccgacacgcccgaagacagcctgatgctggcccagctcgaacagacgctgcaggag
tggcaggagagcgccgaggaggccgggctgacccgcgaccttccgctctccgtggtgcgc
gagcactggctggggcagatcgacgagtcgagcctgtcgcagcgcttcatggccggcgcg
gtgaacttcgccaccctgatgccgatgcgcgccatccccttcaagcgcgtctgcctgctg
ggcatgaacgacggcgactacccgcgcagccagccgccgatggacttcgacctgatgaac
ggcgactaccgccccggcgaccgctcgcgccgcgaggatgaccgctacctgttcctggaa
gcgctgctctccgcccgggagcagctctatgtcagctgggtgggccgcagcatcgttgac
aacgccgagaagccgccctcggtgctggtcggccagctgcgcgaccatcttcaggccggc
tggaacacgacggacggcgctgatctgctcgattcgctcaccaccgcgcacccgctgcag
ccgttcagccgcacctacttccccagcgaagcgcagcaggccgagcgcaacgtctcggcc
cggcggctgttcacctacgcccacgagtggcgcgacattcacggacaagcgcatggcgaa
gcgatggcggaagcagcgcccctcgacctggaggcatataaacaggacacgccgctgaca
ctgcaccaactgggtaattttttgcgcgacccggcgaaggccttctttaccacccggctc
aaggtcttccttgagcgcgaggacatcgtcagcctcgaccacgagcccttcgccctggac
ggcctcggcaactggcagctgcaggacctgctgatccgcgagcagcgccgcgccgtggac
gagaaccaaccccgcgagccggccatgctggccaccctcgaccgcctgcagggccaaggc
gtgctggccatgggcgccttcggcgagcgcatgcgcgagcagctcaccgaaccgatgccg
gaactgttcgacgcctatgaagccgcgctggacgagtggccccacgccatcgaagagccc
gagccggtgcagctcaacgtgcccggtgccccgcctctagaggattggctcgacgagctg
cgccgcgacccagagggcaaccgctgccgcctggtgctggtcagcagcagcctgatcaag
aagggcaagtatcactggcaacacatcttgcgtcactgggtagcgcacctggccggtcat
ctggaaggccaagccatgacgacgaggctgctctccaaggccggccacgtgacactgctg
ccgctcgaccaggaactcgcccgcggccacctgcgcgagatcgtcaaagcctggcaggcc
ggcatgcgcgagccgctgccgctggcctgcgacaccgccttcgtctggctgagcaaactg
ggaacgccagagagtgagcgcgacagcgacgcctggcacgctgcccgcaaggcctacgag
ggtgacgactacaacgccggcgaagtgggccgtaacgcctacctcgcccaccgctggcca
accttcacccggctctacgaagctcgccaggacgccctctgcttcgccgaactcaccgaa
tggctgctcgccccggtgcacctggcagtcaaaggggacaagaaagagagcgggaagaag
acaggtggcaagaaggaagtgaaggcaacggggagccaagcatga
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