Halomonas sp. 1513: BWR19_17430
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Entry
BWR19_17430 CDS
T04761
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
halo
Halomonas sp. 1513
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halo03021
]
BWR19_17430
Transcription machinery [BR:
halo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BWR19_17430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
DUF6026
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
APX94564
LinkDB
All DBs
Position
3819900..3822848
Genome browser
AA seq
982 aa
AA seq
DB search
MSEFSPGQRWISDGEAELGLGTILNVDFRSVTVLFSASQETRTYSVRQAPLTRVAFAPGD
RVQSAEGWQMTVDDSKELDGLVVYIGEDDDGKLRELPEARLADSMQFDQARDRLLTGQVD
RNDWFDLRFRTLHHHQRIEQNPALGLAGPKIDLIPHQLYIADEVARRHAPRVLLADEVGL
GKTIEAGLILHRLLLTGRAERALILVPDSLTHQWLVELLRRFALDVRLLDEHQSLAHLDG
NPFESAQLILASQQWLFANPQRQTQAQSCDWDLLIVDEAHHLDWQPEQVGPGYACVESLA
ARTEGVLLLTATPEQMGVASHFARLRLLDPERYQDLEHFKAEEHGYARVAEAVDALERLA
EQDVPSDADRDCVAAVVDDADSQALLAVLGSAESSDEQRQVARRELREQLLDRHGTGRVM
FRNSRRHVGGFPARQLHVTPLALPSAYRRVLRRLERDEDYLDELLIETGLDHPEVVLYLD
AMYRALPHDPLNEEPWWRIDPRVTWLLELLTEVGRDKLLVIAHDRDTATDLAKALLALGG
IHAPVFHEGLSLIERDRAAAAFADEEEDGCQVLVCSEIGSEGRNFQFCRHLVMFDLPLHP
DQLEQRIGRLDRIGQRHAIELHVPVFEASPGERLLRWYRDGMDAFSAPHGIGSDLFAAFG
DALADALLDEESLAEVIDETRTLFEARLAEHDAGRNRLLEWGACRPARAEAVIDAICELD
HDKALPRYLDQALDIFGVDSQELGGRVLHLQPSQHMLDGLPGLVKGEEGFSATLSRTVAL
TRDDVQRLSWEHPLLREMMGRILDGQMGNTALALLKHPAIPAGRLMAELVFRTHCPAPRR
LHLNRFLPATAVRVLLDESGANLSDKVSFSGLSKNLQKVKKAVARDLIKSRHDQLRGLLI
QGEAEAERELPSIVEAAQIRMREALDGELTRLQALAERNPAVRDDELRALRDERAALDAA
IEGTRLRLDAVRVIVTVDHDSR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattttctcccggtcagcgctggatcagtgacggcgaagccgagctgggcctg
ggcaccatcctgaacgtcgatttccgcagtgtcaccgtgctgttcagcgccagccaggaa
acccgaacctacagcgtgcgccaggcgccattgacccgcgtggcgttcgcccccggcgat
cgcgtgcagtccgccgaaggctggcagatgaccgtcgacgacagcaaggagctcgatggc
ctggtggtctacatcggcgaggacgacgacggcaagctgcgcgagctgcccgaggcgcgc
ctcgccgacagcatgcagttcgatcaggcccgcgaccgcctgctcaccggccaggtcgac
cgcaacgactggttcgacctgcgctttcgcaccctgcaccaccaccagcgcatcgagcag
aacccggcgctgggcctggccggccccaagatcgacctgattccccaccagctctatatc
gccgacgaggtcgcccggcgccacgccccgcgcgtgctgctggccgacgaagtgggcctg
ggcaagaccatcgaggcggggctgatcctgcaccgcctgctgctcaccggccgcgccgag
cgcgccctgatcctggtccccgacagcctcactcaccagtggctggtcgagctgctgcgt
cgcttcgccctcgacgtgcggctgctcgacgagcaccagagcctggcccacctcgacggc
aaccccttcgagtcggcgcagctgatcctggccagccagcagtggctgttcgccaatcct
cagcgtcagacccaggcccagtcctgcgattgggacctgctgatcgtcgatgaggcccac
cacctcgactggcagcccgagcaggtcggccccggctacgcctgcgtcgagtcactggcg
gcacgcaccgagggtgtgctgctgctcaccgccaccccggagcagatgggcgtggccagc
cacttcgcgcggctgcgcctgctcgaccccgagcgctatcaggacctcgaacacttcaag
gccgaggagcacggctacgcgcgcgtcgccgaagcggtggatgctctcgaacggctggcc
gagcaggatgtgcccagcgacgccgaccgcgactgcgtggcggcggtggtcgacgacgcc
gacagccaggcgctgctggcggtgctcggctcagccgagagcagcgacgagcagcgccag
gtggcgcgtcgcgagctgcgcgagcagctgctcgaccgccacggcaccgggcgggtgatg
ttccgcaacagccgtcgccacgtcggcggcttcccggcgcggcagctgcacgtcacgccg
ctggcgctgccctcggcgtatcgccgcgtgctgcgccgcctcgagcgcgacgaggactac
ctcgacgagctgctgatcgagaccggcctcgaccaccccgaggtggtgctctacctcgac
gccatgtaccgcgccctgccccacgacccgctcaacgaggagccgtggtggcgcatcgac
ccccgcgtcacctggctgctcgagctgctcaccgaggtcggccgcgacaagctgctggtg
atcgcccacgaccgcgacaccgccaccgacctggccaaggcgctgctggcgctgggcggc
atccacgcgccggtgttccacgaggggctgtcgctgatcgagcgcgatcgcgccgcggcg
gccttcgccgatgaggaggaggacggctgccaggtgctggtgtgctcggagatcggctcc
gaggggcgcaacttccagttctgccgccacctggtgatgttcgacctgccgctgcacccc
gaccagctcgagcagcgcatcggccgcctcgaccgcatcggccagcgccacgccatcgaa
ctccatgtgccggtgttcgaagccagccccggcgagcgcctgctgcgctggtaccgcgac
ggcatggacgccttcagcgcaccccacggcatcggcagcgatctgttcgcggcgttcggc
gacgccctggccgacgccctgctcgacgaggagagcctcgccgaggtgatcgacgagacc
cgcacgctgttcgaggcgcgcctggccgagcatgacgccggtcgcaaccgcctgctggag
tggggggcctgccgcccggcccgcgccgaggcggtgatcgatgccatctgcgagctcgac
cacgacaaggcgctgccgcgctacctcgatcaggcgctggatatcttcggcgtcgacagc
caggagctcggcggtcgagtactgcatctgcagcccagccagcacatgctcgacggcctg
cccgggctggtcaaaggcgaggagggcttctcggcgaccctgtcgcgcacggtggcgctg
acccgcgacgacgtccagcgtctctcctgggagcacccgctgctgcgcgagatgatgggg
cgtatcctcgatggtcagatgggcaacaccgccctggcgctgctcaagcacccggcgatt
cccgccggccggctgatggccgagctggtgttccgcacccactgcccggcgcccagacgg
ctgcatctcaaccgcttcctgccggccactgcggtgcgtgtgctgctcgatgagtccggt
gccaacctctccgacaaggtgtcgttcagcgggctgtccaagaacctgcagaaggtcaag
aaggcggtggcccgcgacctgatcaagagccgccatgaccagctccgcgggctgctgatc
cagggcgaagccgaagccgagcgcgagctgccgagcatcgtcgaggcggcgcagatccgc
atgcgcgaggcgctcgacggcgaactcacgcgtcttcaggctctcgccgagcgcaacccg
gcggtgcgcgatgacgagctgcgggcactacgcgacgaacgcgccgccctcgacgccgcc
atcgagggcacccgcctgcgactcgacgcggtgcgcgtgatcgtcaccgtggatcacgac
agccgctga
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