Halomonas sp. 1513: BWR19_18730
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Entry
BWR19_18730 CDS
T04761
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halo
Halomonas sp. 1513
Pathway
halo03420
Nucleotide excision repair
halo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BWR19_18730
03430 Mismatch repair
BWR19_18730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halo03400
]
BWR19_18730
Enzymes [BR:
halo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWR19_18730
DNA repair and recombination proteins [BR:
halo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BWR19_18730
MMR (mismatch excision repair)
Other MMR factors
BWR19_18730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
AAA_22
YfdX
T2SSE
DEAD
Motif
Other DBs
NCBI-ProteinID:
APX94789
LinkDB
All DBs
Position
complement(4086840..4089044)
Genome browser
AA seq
734 aa
AA seq
DB search
MDDVTAILDHLNPAQREAVSAPQGNMLVLAGAGSGKTRVLVHRIAWLLQTEGMSPYAILA
VTFTNKAAREMRTRLEALLGLSLRNMWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLVKRLLKDHRIDDERFPPRQVQYFISGCKEEGLRPHQVDAHGDGYMAQMVELYERYQL
TCERGGLVDFGELLLRSLELLRDTPALLAHYQARFGHVLVDEFQDTNTLQYAWLKLLTGE
SAGMTVVGDDDQSIYGWRGARVENIRRFEQEFHDTRTVRLEQNYRSTSAILDAANALISH
NTGRMGKELWTEGAKGEPISVYAGFNDLDEARFIVDTIGEQVRDGAARREIAILYRSNAQ
SRVLEETLIRQGVPYRIYGGQRFYERLEIKNALAYLRLLLNREDDASLERVINVPARGIG
TRTVEILREHARLNNVSLWQALHDALSDALLKGRAANAVRAFAELIEQLDNDTAGMALHE
IIAHVNHASGLVEHHANEKGEKGQARIENLEELINAARAFTQGDALENQEVGEGAAALEP
FLSEAALNAGDHEADEFEDCVQLMTLHSAKGLEFPIVFVSGVEEGLFPHKMSLEEPGRLE
EERRLCYVGLTRAMRKLYLTYAELRRLHGKETFQRASRFLRELPEELLEEVRLRGQISRP
VTARPAVGLSRQTSVDGGGDLPSLSLGQRVSHPLFGEGVILNAEGEGERARVQVSFEGEG
DKWLVLGFAKLTPL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtcacggcgattctcgatcacctcaatcccgcccagcgcgaggcggtcagc
gcgccccagggcaatatgctggtgctcgccggggccggttccggcaagacccgggtgctg
gtgcatcgtatcgcctggctgctgcagaccgagggcatgtcgccctacgccatcctcgcc
gtgaccttcaccaacaaggcggcccgcgagatgcgcacccgcctcgaagcgctgctcggc
ctgtcgctgcgcaacatgtgggtgggtaccttccactccatcgcccaccgtctgctgcgc
acccactggcaggatgcgcggctgccccagcacttccagatcatcgacagcgacgaccag
ctgcgcctggtcaagcggctgctcaaggatcaccgcatcgacgacgagcgctttccgccg
cgccaggtgcagtacttcatctccggctgcaaggaggaggggctgcggccgcaccaggtc
gatgcccacggcgatggttacatggcgcagatggtcgagctctacgaacgctatcagctg
acctgcgagcgcggtgggctggtcgacttcggcgaactgctgctcaggagcctcgagctg
ctgcgcgataccccggcgctgctggcccactaccaggcgcgcttcggccatgtgctggtc
gacgagttccaggacaccaacaccctgcagtacgcctggctcaagctgctcaccggcgag
agtgccggcatgaccgtggtcggcgacgacgaccagtcgatctacggctggcgcggcgcg
cgggtcgagaacattcgccgcttcgagcaggagttccacgacacccgtaccgtgcgcctc
gagcagaactaccgctccaccagcgccatcctcgacgccgccaatgccttgatcagccac
aacaccgggcgcatgggcaaggagctgtggaccgagggcgccaagggcgagccgatctcg
gtctatgccggcttcaacgacctcgatgaagcgcgcttcatcgtcgataccattggcgag
caggtgcgcgacggcgcggcgcgccgcgagatcgcgattctctatcgctccaacgcccag
tcgcgggtgctcgaggagaccctgatccgccagggcgtgccctaccgcatctacggcggc
cagcgcttctacgagcgcctcgagatcaagaacgccctggcctacctgcggctgctgctc
aatcgcgaggacgacgcctcgctggagcgcgtcatcaacgtgccggcccgcggcatcggt
acccgcaccgtggagatcctgcgcgagcatgcgcggctcaacaacgtctcgctgtggcag
gcgctgcacgacgcgctcagcgacgcgctgctcaagggccgcgccgccaacgcggtgcgc
gccttcgccgagctgatcgaacagctcgacaacgataccgccggcatggcgttgcacgag
atcatcgcccacgtgaaccacgccagcgggctggtcgagcaccacgccaacgagaagggc
gagaagggccaggcgcggatcgagaacctcgaggagctgatcaacgccgcccgcgccttt
acccagggtgatgcgctggagaatcaggaggtcggcgagggggccgcggcgctggagcca
ttcctctccgaggcggcgctcaacgccggcgatcacgaggccgacgagttcgaggactgc
gtgcagctgatgaccctgcactccgccaaggggctggagttccccatcgtgttcgtctcc
ggggtcgaggaggggctgtttccgcacaagatgtcgctggaggagccggggcgcctcgag
gaggagcgccggctctgctatgtgggtctgacccgtgccatgcgcaagctctacctgacc
tacgccgagctgcgtcggctgcacggcaaggagaccttccagcgggcgtcgcgcttcctg
cgcgagctgcccgaggagctgctcgaggaggtccgcctgcgcggccagatctcgcgcccg
gtcaccgccaggccggcggtgggcctgtcgcgccagacctcggtggatggcggcggcgac
ttgcccagcctgtcgctgggccagcgggtcagccatccgctgttcggcgagggggtgatc
ctcaacgccgagggcgagggcgaacgcgcccgggtccaggtcagcttcgagggtgaaggc
gacaagtggttggtactgggctttgccaagctgacgccgctgtag
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