Halorubrum sp. PV6: DOS48_00430
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Entry
DOS48_00430 CDS
T05770
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
halp
Halorubrum sp. PV6
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halp03016
]
DOS48_00430 (rnz)
Enzymes [BR:
halp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DOS48_00430 (rnz)
Transfer RNA biogenesis [BR:
halp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DOS48_00430 (rnz)
Prokaryotic type
DOS48_00430 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AZQ13403
UniProt:
A0A3S9LCT8
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All DBs
Position
complement(88574..89506)
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AA seq
310 aa
AA seq
DB search
MSLRVTFLGTGGAVPTTERAPSALFVNREGDRLLFDCGEGTQRGMMRHGTGFGIDHLFVS
HLHGDHVLGIPGLVQTLGFNDREDPLTIHCPPGTGADLHDLVHAVGHDPAFDVRLNEVAP
GSVALDADGYEVRAFETVHRTKSQGYVLEEDDRPGRFDRPKAEELGVPVGPKFGRLHAGE
SVEAEDGSIVEPEQVVGPPRPGRTLVYTADTRPREGTVAVAADADLLVHDATFADDMADR
ARDTAHSTGREAGEIAARADAKRLALVHISSRYAADASPIRREAAGAFDGDVLLPDDGDL
FEVPFPGADE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcgcgtcacgtttctcggaacgggcggcgccgtcccgaccaccgagcgcgcg
ccgagcgcactgttcgtcaaccgcgagggcgaccgcctgctgttcgactgcggggagggc
acccaacgcggcatgatgcggcacggaaccgggttcgggatcgaccacctgttcgtctcg
cacctccacggcgaccacgtcctcgggattccggggctcgtccagacgctcgggttcaac
gaccgcgaggacccgctcacgatccactgcccgccggggaccggagcggacctccacgac
ctcgtccacgcggtcggccacgacccggcgttcgacgtgcggctcaacgaggtcgccccc
ggatcggtcgcgctcgacgccgacggctacgaggtccgcgcgttcgagacggtccaccgg
acgaaatcgcagggctacgtgctcgaagaagacgacaggccggggcggttcgaccgcccg
aaggccgaggagttgggcgtcccggtcggaccgaagttcggccgcctgcacgccggcgaa
tccgtcgaggccgaggacggttcgattgtcgaaccggagcaggtcgtggggccgccgcga
ccgggacggacgctcgtgtacaccgccgacacccggccgcgagagggcaccgtcgcggtc
gccgcggacgccgacctgctcgtccacgacgccaccttcgccgacgacatggcggaccgc
gcccgcgacacggcgcactcgaccgggcgagaggccggggagatagccgcccgcgccgac
gcgaagcggctggcgctggtccacatctcctcgcggtacgccgccgacgcctcgccgatc
cgcagggaggcggcgggcgcgttcgacggcgacgtgctcctgccggacgacggcgacctg
ttcgaggtcccgttccccggcgcggacgagtga
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