Halorubrum sp. PV6: DOS48_00545
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Entry
DOS48_00545 CDS
T05770
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
halp
Halorubrum sp. PV6
Pathway
halp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DOS48_00545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halp03021
]
DOS48_00545
Enzymes [BR:
halp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DOS48_00545
Transcription machinery [BR:
halp03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DOS48_00545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AZQ13425
LinkDB
All DBs
Position
complement(114548..116113)
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AA seq
521 aa
AA seq
DB search
MNRQDRRVVSREYFSDERLAEHHFRSFNNFLDRGMQEVVDEKETIETDIGDKEGQEPVYV
ELGDVRMVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMSIVRGGEDEPEQVVDTTE
TKVGRMPIMVGSDKCNMAGFSDEELIDIGEDPVDPGGYFIVNGSERVLMTSEDLAPNKIL
AEYDSKYGDEIQVAKTFSQRRGYRALVLCERNREGLLEVSFPSVSGSIDFVTLVRALGLE
SDEEIVHRVSDDPEIVKFMLENLEEASVQTTEEAIETLGERVASGQGKNYQLKRANYVID
RYLLPHLHEEGVEEEDVRINKAYYLCRMAEACFELALDRREADDKDHYANKRLKVSGDLM
RDLFRTALNKLARDVKYQLERANMRNRELTVNTVVRSDVLTERLEHPIATGNWVGGRSGV
SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFKARDLHATQWGRICPSETPEGPNCGLVKNF
AQAMELSQTVDDEQGLKRELASMGVEGIPGIEGVERQTADD
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacaagaccgacgcgtggtgtcacgcgagtacttttcagacgaacggctcgcc
gaacaccacttccgatcgttcaacaatttcttggaccgcggcatgcaggaggtcgtcgac
gagaaggagacgatcgagaccgacatcggcgacaaagaggggcaagagcccgtctacgtc
gaactcggtgacgtgcggatggtcaccccgcgcgttcgcgaggccgacgggtccgaagag
ctgttgtaccctcaggaggcccgactgcgaaacatcacgtactcggcgcccgtgttcatg
gagatgtccatcgtgcgcggcggcgaggacgagcccgaacaggtcgtcgacacgaccgag
acgaaggtcggtcggatgccgatcatggtcggctcggacaagtgtaacatggccggcttc
tccgacgaggagctcatcgacatcggcgaggacccggtcgaccccggcggctacttcatc
gtcaacggctccgagcgcgtgctgatgacctcggaggacctggcgccgaacaagattctc
gcggagtacgactcgaagtacggcgacgagattcaggtcgcgaagacgttctctcagcgc
cgcggctaccgcgcgctggtgctgtgtgagcgcaaccgcgaggggctgctcgaagtgtcg
ttcccgtccgtctccggctctatcgacttcgtgaccctcgttcgtgcgctcggactcgag
tccgacgaggagatcgtccaccgcgtctcggacgaccccgagatcgtgaagttcatgctg
gagaacttagaggaggcctcggtccagacgaccgaggaggccatcgagaccctcggcgag
cgcgtcgcctccggccaggggaaaaactaccagctcaagcgggcgaactacgtcatcgac
cgctacctgctcccgcacctccacgaggagggcgtcgaagaggaggacgtgcggatcaac
aaggcgtactacctctgccggatggccgaggcgtgcttcgagctcgccttggaccgacgc
gaggccgacgacaaggaccactacgcgaacaagcgcctgaaggtctccggcgacctgatg
cgcgacctgttccggaccgcgctgaacaagctggcacgcgacgtgaaataccagctcgag
cgggcgaacatgcggaaccgtgagctcacggtcaacacggtcgtccgctccgacgtgctg
accgagcggctcgaacacccgatcgcgacgggtaactgggtgggcggtcggtccggcgtc
tcccagctcgtcgaccggacggactacatgggtgtgctctcgcaccttcggcgcctgcgc
tcgccgctgtcgcgctcgcagccgcacttcaaggcgcgggacctccacgcgacccagtgg
ggtcgcatctgtccctccgagacgccggaggggccgaactgtggcctcgtgaagaacttc
gcgcaggcgatggagctctcgcagacggtagacgacgaacaggggctgaaacgagaactg
gcgtcgatgggtgtcgagggaatccccggcatcgagggcgtcgaacgacagacggcggac
gattaa
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