Halorubrum sp. PV6: DOS48_00685
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Entry
DOS48_00685 CDS
T05770
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
halp
Halorubrum sp. PV6
Pathway
halp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
halp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DOS48_00685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
halp02000
]
DOS48_00685
Transporters [BR:
halp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DOS48_00685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AZQ13446
UniProt:
A0A3Q9EAV7
LinkDB
All DBs
Position
complement(144924..146927)
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AA seq
667 aa
AA seq
DB search
MTRPVSRRAALAGVGLAALSAGCLGRTRNIVGRDRGSQLVLEIAAPPADTDPNAIRIARH
FAENLNAVGVDARISTLGRTDLRRKVLINHNFDAYVGQFQESEPFDPDAMYAFTHSRFVT
EAGWQNPFGLSDVNGVDELLARQRRSAGDDRREAVHALQQTLGELQPFTVVAFPDPLTAV
REDRFENWTDRQPLSVGGLLGLERAGSVAGTEETGTVGGNDTADGNDTADGNDTADGNDT
ADGNDTEDSDGRSIDGLELLGDMPLTDDGEDADDGTLRLVTTDERITENWNPIAAEYRRY
GTFTSLLYDRLALIDDGEVVPWLAAGWERTDDATVELSLRSADWHDGEPVTAADVAFTYE
FLRDTSMGAAESPVPTPTFRGRVSAVESATAVDEETVEIAFDDVNEAVAVRALTVPILPE
HVWTDRTAAASIAGIEFDAETTEAVVTNNEDPVGNGPVRFVEATPEESVTFERNPDHFLR
RSADDGATSGDGTEPLAEIPERFRRKPAFDRLTIEVMGSDIAAVQAVGDGFADATVSSLG
PDSVTRIGREADARLVAGQSGGFYHIGYNARRAPLSNPRFRAVLASLVDKRRLVDVAFDG
YAEPAASPLAATPEWVPAALRWDDRETDPVQPFVGESGSLDAEAARDRLREAGYRYDEEG
RLLAPNP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaccagtcagtcgccgagcggcgctcgcgggtgtcggactcgcggccctgagc
gccggctgtctcggtcgaacgcggaacatcgtggggcgggaccggggctcgcagttggtc
ctggagatcgccgccccgcccgccgacacggacccgaacgcgatccgtatcgccagacac
ttcgccgagaatctgaacgcggtcggcgtcgacgcccgcatcagcaccctcgggcgcacc
gacctccggcgaaaggtcctcatcaaccacaacttcgacgcgtacgtcgggcagttccag
gaatcggagccgttcgacccggacgcgatgtacgcgttcacccactcgcggttcgtcacg
gaggcggggtggcagaacccgttcggactcagcgacgtcaacggcgtcgacgaactgctc
gcgcgccagcgccggtccgccggcgacgaccgccgcgaggcggtacacgccctccagcag
accctcggcgaactccagccgttcaccgtcgtcgcgttccccgacccgctcaccgcggtc
cgcgaggaccgcttcgagaactggacggatcgacagccgctgtccgtcggcgggctgctc
ggtctcgaacgcgccggttcggtggcgggtacggaggagacggggaccgtcggcggcaac
gacaccgccgacggcaacgacaccgccgacggcaacgacaccgccgacggcaacgacacc
gccgacggcaacgacaccgaggacagcgacgggcgctccatcgacgggctggagctgctc
ggcgatatgccgctgacggacgacggtgaggacgcggacgacgggaccctccggctcgtc
acgaccgacgagcgcatcacggagaactggaacccgatcgccgccgagtaccggcggtac
gggacgttcacgtcgcttctgtacgaccggctcgcgctgatcgacgacggggaggtggtc
ccgtggctcgccgccggctgggagcggaccgacgacgcgaccgtcgagctgtcgctccga
tcggccgactggcacgacggggagccggtgacggcggcggacgtcgcgttcacctacgag
ttcctccgggacacctcgatgggcgccgccgagtcgccggtgccgaccccgacgttccgc
gggcgagtgtcggccgtcgagtcggcgaccgcggtcgacgaggagacggtcgagatcgcg
ttcgacgacgtcaacgaggcggtggccgtgcgcgcgctcaccgtgccgatcctcccggaa
cacgtctggaccgaccggaccgcggcggcgtcgatcgccggcatcgagttcgacgccgag
accaccgaggccgtcgtgacgaacaacgaagacccggtcgggaacggccccgtccgcttc
gtcgaggccacgcccgaggagtcggtcacgttcgagcgcaaccccgaccacttcctccgc
cgatccgcggacgacggggcgacgagcggggacgggacggaaccgctggcggagattccg
gagcggttccgtcggaagccggcgttcgaccggctgacgatcgaggtgatggggtcggac
atcgccgcggtacaggcggtcggcgacgggttcgcggacgcgaccgtttcgagtctcggg
ccggactcggtgacgcggatcggtcgcgaggccgacgctcggctcgtcgcggggcagtcc
ggcgggttctaccacatcgggtacaacgcccgccgggcgccgctttcgaacccgcggttc
cgggcggtcctcgcgtcgctcgtcgacaaacggcgcctcgtcgacgtggcgttcgacggg
tacgccgagcccgccgcctcgccgctcgccgccacgccggagtgggtgcctgcggcgttg
cggtgggacgaccgcgagaccgaccccgtacagccgttcgtgggtgagtccggatcgctg
gacgccgaggcggccagagaccggctccgcgaggccgggtatcgatacgacgaggagggg
cggctgctcgcgccgaacccatga
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